Evidence map›Paper›PMID 30355798›Full record

ArticleScience translational medicine2018

Systems biology-based drug repositioning identifies digoxin as a potential therapy for groups 3 and 4 medulloblastoma.

Lei Huang, Sarah Garrett Injac, Kemi Cui, Frank Braun, Qi Lin, Yuchen Du, Huiyuan Zhang, Mari Kogiso, Holly Lindsay, Sibo Zhao and 7 more

Abstract read
In one paragraph

Article in Science translational medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 74 citations in OpenAlex.

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  13. Guiding Drug Repositioning for Cancers Based on Drug Similarity Networks.International journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Lei HuangDepartment of Systems Medicine and Bioengineering, Houston Methodist Research Institute and Cancer Center, Weill Cornell Medicine, Houston, TX 77030, USA.ORCID 0000-0002-0322-6078
Sarah Garrett InjacPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0002-6389-369X
Kemi CuiDepartment of Systems Medicine and Bioengineering, Houston Methodist Research Institute and Cancer Center, Weill Cornell Medicine, Houston, TX 77030, USA.ORCID 0000-0003-4064-468X
Frank BraunPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.
Qi LinPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.
Yuchen DuPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.
Huiyuan ZhangPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.
Mari KogisoPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.
Holly LindsayPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.
Sibo ZhaoPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.
Patricia BaxterPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA.
Adesina AdekunleDepartment of Pathology, Texas Children's Hospital, Houston, TX 77030, USA.
Tsz-Kwong ManTexas Children's Cancer and Hematology Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
Hong ZhaoDepartment of Systems Medicine and Bioengineering, Houston Methodist Research Institute and Cancer Center, Weill Cornell Medicine, Houston, TX 77030, USA.
Xiao-Nan LiPreclinical Neuro-Oncology Research Program, Baylor College of Medicine, Houston, TX 77030, USA. stwong@houstonmethodist.org clau@connecticutchildrens.org xiaonan@bcm.edu.ORCID 0000-0002-6719-3789
Ching C LauTexas Children's Cancer and Hematology Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA. stwong@houstonmethodist.org clau@connecticutchildrens.org xiaonan@bcm.edu.
Stephen T C WongDepartment of Systems Medicine and Bioengineering, Houston Methodist Research Institute and Cancer Center, Weill Cornell Medicine, Houston, TX 77030, USA. stwong@houstonmethodist.org clau@connecticutchildrens.org xiaonan@bcm.edu.ORCID 0000-0001-9188-6502
Baylor College of Medicine · USHouston Methodist · USTexas Children's Hospital · US

Funding

The Core of the Computational BiologyU54CA149196 · NCI · METHODIST HOSPITAL RESEARCH INSTITUTE · PI WONG, STEPHEN TC · 2010 to 2015
$10.6M
Modeling tumor-stroma crosstalk in lung cancer to identify targets for therapyU01CA188388 · NCI · METHODIST HOSPITAL RESEARCH INSTITUTE · PI MITTAL, VIVEK, WONG, STEPHEN TC · 2015 to 2019
$2.5M
(PQD-5) Patient derived orthotopic xenograft models for drug response predictionR01CA185402 · NCI · BAYLOR COLLEGE OF MEDICINE · PI LI, XIAONAN · 2014 to 2017
$1.3M
NCI NIH HHS R01 CA185402NCI NIH HHS U01 CA188388NCI NIH HHS U54 CA149196
6 · The paper itself

Abstract

Medulloblastoma (MB) is the most common malignant brain tumor of childhood. Although outcomes have improved in recent decades, new treatments are still needed to improve survival and reduce treatment-related complications. The MB subtypes groups 3 and 4 represent a particular challenge due to their intragroup heterogeneity, which limits the options for "rational" targeted therapies. Here, we report a systems biology approach to drug repositioning that integrates a nonparametric, bootstrapping-based simulated annealing algorithm and a 3D drug functional network to characterize dysregulated driver signaling networks, thereby identifying potential drug candidates. From more than 1300 drug candidates studied, we identified five members of the cardiac glycoside family as potentially inhibiting the growth of groups 3 and 4 MB and subsequently confirmed this in vitro. Systemic in vivo treatment of orthotopic patient-derived xenograft (PDX) models of groups 3 and 4 MB with digoxin, a member of the cardiac glycoside family approved for the treatment of heart failure, prolonged animal survival at plasma concentrations known to be tolerated in humans. These results demonstrate the power of a systematic drug repositioning method in identifying a potential treatment for MB. Our strategy could potentially be used to accelerate the repositioning of treatments for other human cancers that lack clearly defined rational targets.

Indexed as

Drug RepositioningSystems BiologyAnimalsApoptosisBrain NeoplasmsCell Line, TumorCell ProliferationDigoxinGene Expression Regulation, NeoplasticMedulloblastomaMice, Inbred NODMice, SCIDMitochondriaRadiation, IonizingSignal TransductionSurvival AnalysisDigoxin

Identifiers

PMID30355798
PMCPMC6644046
OpenAlexW2898321218

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.