Evidence map›Paper›PMID 30355738›Full record

ArticleThe Journal of biological chemistry2018

The cyclic phosphodiesterase CNP and RNA cyclase RtcA fine-tune noncanonical

Irem Unlu, Yanyan Lu, Xiaozhong Wang

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Enzymology of the metazoan tRNA ligase complex: a lifetime in cycles.Cellular and molecular life sciences : CMLS · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Insights into the structure and function of the RNA ligase RtcB.Cellular and molecular life sciences : CMLS · 2023
    Review
  6. Article
  7. Article
  8. RNA ligation precedes the retrotransposition of U6/LINE-1 chimeric RNA.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Irem UnluFrom the Department of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208.
Yanyan LuFrom the Department of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208.
Xiaozhong WangFrom the Department of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208 awang@northwestern.edu.ORCID 0000-0003-0219-0752
Northwestern University · US

Funding

RNA Ligation Pathways in Mammalian Unfolded Protein ResponseR01GM120307 · NIGMS · NORTHWESTERN UNIVERSITY · PI WANG, XIAOZHONG ALEC · 2017 to 2020
$1.2M
NIGMS NIH HHS R01 GM120307
6 · The paper itself

Abstract

The activity of X box-binding protein 1 (XBP1), a master transcriptional regulator of endoplasmic reticulum (ER) homeostasis and the unfolded protein response (UPR), is controlled by a two-step noncanonical splicing reaction in the cytoplasm. The first step of nuclease cleavage by inositol-requiring enzyme 1 (IRE1), a protein kinase/endoribonuclease, is conserved in all eukaryotic cells. The second step of RNA ligation differs biochemically among species. In yeast, tRNA ligase 1 (Trl1) and tRNA 2'-phosphotransferase 1 (Tpt1) act through a 5'-PO

Indexed as

RNA Splicing2',3'-Cyclic Nucleotide 3'-PhosphodiesteraseAnimalsEndoplasmic Reticulum StressHEK293 CellsHumansLigasesMiceTumor Protein, Translationally-Controlled 1X-Box Binding Protein 12',3'-Cyclic Nucleotide 3'-PhosphodiesteraseCNP protein, humanCnp protein, mouseLigasesRNA 3'-terminal phosphate cyclaseTPT1 protein, humanTpt1 protein, mouseTumor Protein, Translationally-Controlled 1X-Box Binding Protein 1XBP1 protein, humanCNPgene regulationRNA processingRNA splicingRtcARtcBsignalingstress responseTrpt1unfolded protein response (UPR)X-box binding protein 1 (XBP1)

Identifiers

PMID30355738
PMCPMC6302167
OpenAlexW2898360043

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.