Evidence map›Paper›PMID 30353030›Full record

ArticleLeukemia2019

De novo gene mutations in normal human memory B cells.

L M Slot, T A M Wormhoudt, M J Kwakkenbos, K Wagner, A Ballering, A Jongejan, A C M van Kampen, J E J Guikema, R J Bende, C J M van Noesel

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In one paragraph

Article in Leukemia, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

L M SlotDepartment of Pathology, Amsterdam UMC, Amsterdam, The Netherlands.
T A M WormhoudtDepartment of Pathology, Amsterdam UMC, Amsterdam, The Netherlands.
M J KwakkenbosAIMM Therapeutics, Amsterdam, The Netherlands.
K WagnerAIMM Therapeutics, Amsterdam, The Netherlands.
A BalleringDepartment of Pathology, Amsterdam UMC, Amsterdam, The Netherlands.
A JongejanDepartment of Medical Bioinformatics, Academic Medical Center, Amsterdam, Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0002-8948-2549
A C M van KampenDepartment of Medical Bioinformatics, Academic Medical Center, Amsterdam, Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0003-1025-7232
J E J GuikemaDepartment of Pathology, Amsterdam UMC, Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0001-6894-3441
R J Bende *Department of Pathology, Amsterdam UMC, Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0002-5173-3138
C J M van Noesel *Department of Pathology, Amsterdam UMC, Amsterdam, The Netherlands. c.j.vannoesel@amc.uva.nl.
Amsterdam University Medical Centers · NLAIMM Therapeutics (Netherlands) · NLAmsterdam UMC Location University of Amsterdam · NLLymphoma Research Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the past years, the genomes of thousands of tumors have been elucidated. To date however, our knowledge on somatic gene alterations in normal cells is very limited. In this study, we demonstrate that tetanus-specific human memory B lymphocytes carry a substantial number of somatic mutations in the coding regions of the genome. Interestingly, we observed a statistically significant correlation between the number of exome mutations and those present in the immunoglobulin heavy variable regions. Our findings indicate that the majority of these genomic mutations arise in an antigen-dependent fashion, most likely during clonal expansion in germinal centers. The knowledge that normal B cells accumulate genomic alterations outside the immunoglobulin loci during development is relevant for our understanding of the process of lymphomagenesis.

Indexed as

Immunologic MemoryMutationB-LymphocytesClonal Selection, Antigen-MediatedExome SequencingHumansImmunoglobulin Heavy ChainsTetanusImmunoglobulin Heavy Chains

Identifiers

PMID30353030
OpenAlexW2897394547

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.