Evidence map›Paper›PMID 30352857›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

The mechanism of resistance to favipiravir in influenza.

Daniel H Goldhill, Aartjan J W Te Velthuis, Robert A Fletcher, Pinky Langat, Maria Zambon, Angie Lackenby, Wendy S Barclay

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 185 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
185citing papers in PubMed, 1 pooled it
29.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

185 citing papers in PubMed, 1 synthesis or guideline pooled it, 311 citations in OpenAlex.

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  9. Mutation rate variability in viral populations: Implications for lethal mutagenesis.Proceedings of the National Academy of Sciences of the United States of America · 2026
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125 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Daniel H GoldhillNational Infection Service, Public Health England, London NW9 5EQ, United Kingdom.ORCID 0000-0003-4597-5963
Aartjan J W Te VelthuisDivision of Virology, Department of Pathology, Addenbrooke's Hospital, University of Cambridge, Cambridge CB2 2QQ, United Kingdom.
Robert A FletcherSection of Molecular Virology, Imperial College London, London W2 1PG, United Kingdom.
Pinky LangatSection of Molecular Virology, Imperial College London, London W2 1PG, United Kingdom.
Maria ZambonNational Infection Service, Public Health England, London NW9 5EQ, United Kingdom.
Angie LackenbyNational Infection Service, Public Health England, London NW9 5EQ, United Kingdom.
Wendy S BarclaySection of Molecular Virology, Imperial College London, London W2 1PG, United Kingdom; w.barclay@imperial.ac.uk.ORCID 0000-0002-3948-0895
Imperial College London · GBPublic Health England · GBUniversity of Cambridge · GB

Funding

Wellcome TrustWellcome Trust 200187/Z/15/ZWellcome Trust 206579/Z/17/Z
6 · The paper itself

Abstract

Favipiravir is a broad-spectrum antiviral that has shown promise in treatment of influenza virus infections. While emergence of resistance has been observed for many antiinfluenza drugs, to date, clinical trials and laboratory studies of favipiravir have not yielded resistant viruses. Here we show evolution of resistance to favipiravir in the pandemic H1N1 influenza A virus in a laboratory setting. We found that two mutations were required for robust resistance to favipiravir. We demonstrate that a K229R mutation in motif F of the PB1 subunit of the influenza virus RNA-dependent RNA polymerase (RdRP) confers resistance to favipiravir in vitro and in cell culture. This mutation has a cost to viral fitness, but fitness can be restored by a P653L mutation in the PA subunit of the polymerase. K229R also conferred favipiravir resistance to RNA polymerases of other influenza A virus strains, and its location within a highly conserved structural feature of the RdRP suggests that other RNA viruses might also acquire resistance through mutations in motif F. The mutations identified here could be used to screen influenza virus-infected patients treated with favipiravir for the emergence of resistance.

Indexed as

MutationAmidesAnimalsAntiviral AgentsArginineDogsDrug Resistance, ViralGene ExpressionInfluenza A Virus, H1N1 SubtypeLysineMadin Darby Canine Kidney CellsMicrobial Sensitivity TestsProtein SubunitsPyrazinesRNA-Dependent RNA PolymeraseViral ProteinsAmidesAntiviral AgentsArgininefavipiravirLysineProtein SubunitsPyrazinesRNA-Dependent RNA PolymeraseViral Proteinsantiviralinfluenzapolymeraseresistancevirus

Identifiers

PMID30352857
PMCPMC6233120
OpenAlexW2895861302

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.