Evidence map›Paper›PMID 30352851›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Physical interactions reduce the power of natural selection in growing yeast colonies.

Andrea Giometto, David R Nelson, Andrew W Murray

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Mechanics limits ecological diversity and promotes heterogeneity in confined bacterial communities.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Article
  12. Article
  13. Proliferating active matter.Nature reviews. Physics · 2023
    Review
  14. Impact of crowding on the diversity of expanding populations.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Article
  16. Article
  17. Stochastic establishment of β-lactam-resistantProceedings. Biological sciences · 2022
    Article
  18. Article
  19. Population genetics in microchannels.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Ecohydrology 2.0.Rendiconti Lincei. Scienze fisiche e naturali · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Andrea GiomettoDepartment of Physics, Harvard University, Cambridge, MA 02138; andrea.giometto@gmail.com awm@mcb.harvard.edu.ORCID 0000-0002-0544-6023
David R NelsonDepartment of Physics, Harvard University, Cambridge, MA 02138.
Andrew W MurrayFaculty of Arts and Sciences Center for Systems Biology, Harvard University, Cambridge, MA 02138; andrea.giometto@gmail.com awm@mcb.harvard.edu.ORCID 0000-0002-0868-6604

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial populations often assemble in dense populations in which proliferating individuals exert mechanical forces on the nearby cells. Here, we use yeast strains whose doubling times depend differently on temperature to show that physical interactions among cells affect the competition between different genotypes in growing yeast colonies. Our experiments demonstrate that these physical interactions have two related effects: they cause the prolonged survival of slower-growing strains at the actively-growing frontier of the colony and cause faster-growing strains to increase their frequency more slowly than expected in the absence of physical interactions. These effects also promote the survival of slower-growing strains and the maintenance of genetic diversity in colonies grown in time-varying environments. A continuum model inspired by overdamped hydrodynamics reproduces the experiments and predicts that the strength of natural selection depends on the width of the actively growing layer at the colony frontier. We verify these predictions experimentally. The reduced power of natural selection observed here may favor the maintenance of drug-resistant cells in microbial populations and could explain the apparent neutrality of interclone competition within tumors.

Indexed as

Models, StatisticalSelection, GeneticBiomechanical PhenomenaCell DivisionGenotypeHydrodynamicsMechanotransduction, CellularSaccharomyces cerevisiaeTemperatureevolutionextinctionrange expansionselective sweepspatial population genetics

Identifiers

PMID30352851
PMCPMC6233111

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.