Evidence map›Paper›PMID 30352129›Full record

ArticleMedical physics2019

Fully automatic segmentation of 4D MRI for cardiac functional measurements.

Yan Wang, Yue Zhang, Wanling Xuan, Evan Kao, Peng Cao, Bing Tian, Karen Ordovas, David Saloner, Jing Liu

Abstract read
In one paragraph

Article in Medical physics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. DSMRI: Domain Shift Analyzer for Multi-Center MRI Datasets.Diagnostics (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Yan WangDepartment of Radiology, University of California San Francisco, San Francisco, CA, 94121, USA.
Yue ZhangDepartment of Surgery, University of California San Francisco, San Francisco, CA, 94121, USA.
Wanling XuanThe Ohio State University Wexner Medical Center, Columbus, Ohio, 43210, USA.
Evan KaoDepartment of Radiology, University of California San Francisco, San Francisco, CA, 94121, USA.
Peng CaoDepartment of Radiology, University of California San Francisco, San Francisco, CA, 94107, USA.
Bing TianDepartment of Radiology, Changhai Hospital, Shanghai, 200433, China.
Karen OrdovasDepartment of Radiology, University of California San Francisco, San Francisco, CA, 94121, USA.
David SalonerDepartment of Radiology, University of California San Francisco, San Francisco, CA, 94121, USA.
Jing LiuDepartment of Radiology, University of California San Francisco, San Francisco, CA, 94108, USA.
University of California, San Francisco · USSecond Military Medical University · CNThe Ohio State University Wexner Medical Center · USUniversity of California, Berkeley · USUniversity of San Francisco · US

Funding

4D MRI Development for Cardiovascular ImagingK25EB014914 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIU, JING · 2012 to 2016
$842k
Comprehensive quantitative magnetic resonance imaging in assessment of aortic valve diseaseR56HL133663 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIU, JING · 2016 to 2016
$367k
NHLBI NIH HHS R56 HL133663NIBIB NIH HHS K25 EB014914NIH HHS K25EB014914NIH HHS R56HL133663
6 · The paper itself

Abstract

purposeSegmentation of cardiac medical images, an important step in measuring cardiac function, is usually performed either manually or semiautomatically. Fully automatic segmentation of the left ventricle (LV), the right ventricle (RV) as well as the myocardium of three-dimensional (3D) magnetic resonance (MR) images throughout the entire cardiac cycle (four-dimensional, 4D), remains challenging. This study proposes a deformable-based segmentation methodology for efficiently segmenting 4D (3D + t) cardiac MR images.

methodsThe proposed methodology first used the Hough transform and the local Gaussian distribution method (LGD) to segment the LV endocardial contours from cardiac MR images. Following this, a novel level set-based shape prior method was applied to generate the LV epicardial contours and the RV boundary.

resultsThis automatic image segmentation approach has been applied to studies on 17 subjects. The results demonstrated that the proposed method was efficient compared to manual segmentation, achieving a segmentation accuracy with average Dice values of 88.62 ± 5.47%, 87.35 ± 7.26%, and 82.63 ± 6.22% for the LV endocardial, LV epicardial, and RV contours, respectively.

conclusionsWe have presented a method for accurate LV and RV segmentation. Compared to three existing methods, the proposed method can successfully segment the LV and yield the highest Dice value. This makes it an option for clinical assessment of the volume, size, and thickness of the ventricles.

Indexed as

Magnetic Resonance ImagingAutomationHeartHeart VentriclesHumansImaging, Three-Dimensionalleft ventriclelevel set methodright ventriclesegmentation

Identifiers

PMID30352129
PMCPMC6322927
OpenAlexW2898311179

What OpenQuestion holds

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LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.