Evidence map›Paper›PMID 30351338›Full record

ArticleLab on a chip2018

SD-chip enabled quantitative detection of HIV RNA using digital nucleic acid sequence-based amplification (dNASBA).

Jiasi Wang, Jason E Kreutz, Alison M Thompson, Yuling Qin, Allison M Sheen, Jingang Wang, Li Wu, Shihan Xu, Ming Chang, Dana N Raugi and 3 more

Abstract read
In one paragraph

Article in Lab on a chip, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Jiasi WangDepartment of Chemistry, University of Washington, Seattle, Washington 98195, USA. chiu@uw.edu.
Jason E Kreutz
Alison M Thompson
Yuling Qin
Allison M Sheen
Jingang Wang
Li Wu
Shihan Xu
Ming Chang
Dana N Raugi
Robert A Smith
Geoffrey S Gottlieb
Daniel T Chiu

Funding

Digital LAMP as a point of care assay for HPV detectionR01EB021150 · NIBIB · UNIVERSITY OF WASHINGTON · PI CHIU, DANIEL T · 2016 to 2019
$1.9M
NIBIB NIH HHS R01 EB021150
6 · The paper itself

Abstract

Quantitative detection of RNA is important in molecular biology and clinical diagnostics. Nucleic acid sequence-based amplification (NASBA), a single-step method to amplify single-stranded RNA, is attractive for use in point-of-care (POC) diagnostics because it is an isothermal technique that is as sensitive as RT-PCR with a shorter reaction time. However, NASBA is limited in its ability to provide accurate quantitative information, such as viral load or RNA copy number. Here we test a digital format of NASBA (dNASBA) using a self-digitization (SD) chip platform, and apply it to quantifying HIV-1 RNA. We demonstrate that dNASBA is more sensitive and accurate than the real-time quantitative NASBA, and can be used to quantify HIV-1 RNA in plasma samples. Digital NASBA is thus a promising POC diagnostics tool for use in resource-limited settings.

Indexed as

Lab-On-A-Chip DevicesHIV-1HumansRNA, ViralSelf-Sustained Sequence ReplicationRNA, Viral

Identifiers

PMID30351338
PMCPMC6219917

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.