Evidence map›Paper›PMID 30348816›Full record

ArticlePlant physiology2018

Network Analysis Reveals a Role for Salicylic Acid Pathway Components in Shade Avoidance.

Kazunari Nozue, Upendra Kumar Devisetty, Saradadevi Lekkala, Patricia Mueller-Moulé, Aurélie Bak, Clare L Casteel, Julin N Maloof

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 32 citations in OpenAlex.

  1. Near-Infrared Excited MnMolecules (Basel, Switzerland) · 2025
    Article
  2. Article
  3. Shade-Induced Leaf Senescence in Plants.Plants (Basel, Switzerland) · 2023
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Kazunari NozueDepartment of Plant Biology, University of California, Davis, California 95616.
Upendra Kumar DevisettyDepartment of Plant Biology, University of California, Davis, California 95616.ORCID 0000-0003-4686-7235
Saradadevi LekkalaDepartment of Plant Biology, University of California, Davis, California 95616.
Patricia Mueller-MouléDepartment of Plant Biology, University of California, Davis, California 95616.
Aurélie BakDepartment of Plant Pathology, University of California, Davis, California 95616.
Clare L CasteelDepartment of Plant Pathology, University of California, Davis, California 95616.
Julin N MaloofDepartment of Plant Biology, University of California, Davis, California 95616 jnmaloof@ucdavis.edu.ORCID 0000-0002-9623-2599
University of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants have sophisticated mechanisms for sensing neighbor shade. To maximize their ability to compete for light, plants respond to shade through enhanced elongation and physiological changes. The shade avoidance response affects many different organs and growth stages, yet the signaling pathways underlying this response have mostly been studied in seedlings. We assayed transcriptome changes in response to shade across a 2-d time course in the wild type and 12 Arabidopsis (

Indexed as

Gene Regulatory NetworksArabidopsisArabidopsis ProteinsCyclopentanesGene Expression Regulation, PlantIndoleacetic AcidsIntramolecular TransferasesMembrane Transport ProteinsMetabolic Networks and PathwaysMixed Function OxygenasesMutationOxylipinsPhytochrome BPlants, Genetically ModifiedSalicylic AcidArabidopsis ProteinsCyclopentanesEDS5 protein, ArabidopsisIndoleacetic AcidsIntramolecular Transferasesisochorismate synthasejasmonic acidMembrane Transport ProteinsMixed Function OxygenasesOxylipinsPHYB protein, ArabidopsisPhytochrome BSalicylic AcidYUCCA8 protein, Arabidopsis

Identifiers

PMID30348816
PMCPMC6288734
OpenAlexW2896250270

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.