Evidence map›Paper›PMID 30348748›Full record

ArticleThe Journal of cell biology2018

Ribosome biogenesis factor Ltv1 chaperones the assembly of the small subunit head.

Jason C Collins, Homa Ghalei, Joanne R Doherty, Haina Huang, Rebecca N Culver, Katrin Karbstein

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jason C CollinsDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL.ORCID 0000-0002-7653-0070
Homa GhaleiDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL.
Joanne R DohertyDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL.
Haina HuangDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL.
Rebecca N CulverDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL.ORCID 0000-0002-3963-193X
Katrin KarbsteinDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL kkarbst@scripps.edu.ORCID 0000-0002-4034-1331
Scripps Research Institute · US

Funding

Quality Control in Ribosome Assembly - the Function of Regulatory ProteinsR01GM086451 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARBSTEIN, KATRIN · 2009 to 2019
$4.8M
Kinase-mediated assembly of the mRNA entry channel in 40S ribosomesR01GM117093 · NIGMS · SCRIPPS FLORIDA · PI KARBSTEIN, KATRIN · 2016 to 2019
$1.7M
Howard Hughes Medical Institute 55108536NIGMS NIH HHS R01 GM086451NIGMS NIH HHS R01 GM117093
6 · The paper itself

Abstract

The correct assembly of ribosomes from ribosomal RNAs (rRNAs) and ribosomal proteins (RPs) is critical, as indicated by the diseases caused by RP haploinsufficiency and loss of RP stoichiometry in cancer cells. Nevertheless, how assembly of each RP is ensured remains poorly understood. We use yeast genetics, biochemistry, and structure probing to show that the assembly factor Ltv1 facilitates the incorporation of Rps3, Rps10, and Asc1/RACK1 into the small ribosomal subunit head. Ribosomes from Ltv1-deficient yeast have substoichiometric amounts of Rps10 and Asc1 and show defects in translational fidelity and ribosome-mediated RNA quality control. These defects provide a growth advantage under some conditions but sensitize the cells to oxidative stress. Intriguingly, relative to glioma cell lines, breast cancer cells have reduced levels of LTV1 and produce ribosomes lacking RPS3, RPS10, and RACK1. These data describe a mechanism to ensure RP assembly and demonstrate how cancer cells circumvent this mechanism to generate diverse ribosome populations that can promote survival under stress.

Indexed as

Adaptor Proteins, Signal TransducingBreast NeoplasmsCell Line, TumorFemaleGTP-Binding ProteinsHumansNeoplasm ProteinsRibosomal ProteinsRibosome Subunits, Small, EukaryoticSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdaptor Proteins, Signal TransducingASC1 protein, S cerevisiaeGTP-Binding ProteinsLTV1 protein, S cerevisiaeNeoplasm ProteinsRibosomal ProteinsRPS3 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID30348748
PMCPMC6279377
OpenAlexW2897585702

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.