Evidence map›Paper›PMID 30347350›Full record

ArticleMolecular therapy. Nucleic acids2018

Enhanced Tailored MicroRNA Sponge Activity of RNA Pol II-Transcribed TuD Hairpins Relative to Ectopically Expressed ciRS7-Derived circRNAs.

Anne Kruse Hollensen, Sofie Andersen, Karina Hjorth, Rasmus O Bak, Thomas B Hansen, Jørgen Kjems, Lars Aagaard, Christian Kroun Damgaard, Jacob Giehm Mikkelsen

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. The therapeutic potential of circular RNAs.Nature reviews. Genetics · 2025
    Review
  5. Research Progress on Non-coding RNAs in Cholesteatoma of the Middle Ear.Clinical and experimental otorhinolaryngology · 2023
    Review
  6. Review
  7. eLife · 2020
    Article
  8. Review
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Anne Kruse HollensenDepartment of Biomedicine, Health, Aarhus University, 8000 Aarhus C, Denmark; Department of Molecular Biology and Genetics, Science and Technology, Aarhus University, 8000 Aarhus C, Denmark.
Sofie AndersenDepartment of Biomedicine, Health, Aarhus University, 8000 Aarhus C, Denmark.
Karina HjorthDepartment of Molecular Biology and Genetics, Science and Technology, Aarhus University, 8000 Aarhus C, Denmark.
Rasmus O BakDepartment of Biomedicine, Health, Aarhus University, 8000 Aarhus C, Denmark; Aarhus Institute of Advanced Studies (AIAS), Aarhus University, 8000 Aarhus C, Denmark.
Thomas B HansenDepartment of Molecular Biology and Genetics, Science and Technology, Aarhus University, 8000 Aarhus C, Denmark.
Jørgen KjemsDepartment of Molecular Biology and Genetics, Science and Technology, Aarhus University, 8000 Aarhus C, Denmark.
Lars AagaardDepartment of Biomedicine, Health, Aarhus University, 8000 Aarhus C, Denmark.
Christian Kroun DamgaardDepartment of Molecular Biology and Genetics, Science and Technology, Aarhus University, 8000 Aarhus C, Denmark.
Jacob Giehm MikkelsenDepartment of Biomedicine, Health, Aarhus University, 8000 Aarhus C, Denmark. Electronic address: giehm@biomed.au.dk.
Aarhus University · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As key regulators of gene expression, microRNAs (miRNAs) have emerged as targets in basic experimentation and therapy. Administration of DNA-encoded RNA molecules, targeting miRNAs through base pairing, is one viable strategy for inhibiting specific miRNAs. A naturally occurring circular RNA (circRNA), ciRS-7, serving as a miRNA-7 (miR-7) sponge was recently identified. This has sparked tremendous interest in adapting circRNAs for suppressing miRNA function. In parallel, we and others have demonstrated efficacy of expressed anti-miRNA Tough Decoy (TuD) hairpins. To compare properties of such inhibitors, we express ciRS-7 and TuD-containing miRNA suppressor transcripts from identical vector formats adapted from RNA polymerase II-directed expression plasmids previously used for production of ciRS-7. In general, markedly higher levels of miR-7 suppression with TuD transcripts relative to ciRS-7 are observed, leading to superior miRNA sponge effects using expressed TuD hairpins. Notably however, we find that individual ciRS-7 transcripts are more potent inhibitors of miR-7 activity than individual TuD7-containing transcripts, although each miR-7 seed match target site in ciRS-7 is, on average, less potent than the perfectly matched target sites in the TuD motif. All together, our studies call for improved means of designing and producing circRNAs for customized miRNA targeting to match TuD hairpins for tailored miRNA suppression.

Indexed as

circular RNAciRS-7miRNA spongemiRNA suppressionTuD

Identifiers

PMID30347350
PMCPMC6198105
OpenAlexW2891079747

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.