Evidence map›Paper›PMID 30347198›Full record

ArticleJournal of virological methods2019

Detection of human rhinoviruses by reverse transcription strand invasion based amplification method (RT-SIBA).

Veera Kainulainen, Sonja Elf, Petri Susi, Minna Mäki, Anne Pitkäranta, Janne O Koskinen, Riitta Korpela, Kevin E Eboigbodin

Open access · greenAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Journal of virological methods, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Veera KainulainenDepartment of Pharmacology, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Sonja ElfResearch and Development, Orion Diagnostica Oy, P. O. BOX 83, FI-02101, Espoo, Finland.
Petri SusiInstitute of Biomedicine, Faculty of Medicine, University of Turku, Turku, Finland.
Minna MäkiResearch and Development, Orion Diagnostica Oy, P. O. BOX 83, FI-02101, Espoo, Finland.
Anne PitkärantaFaculty of Medicine, University of Helsinki, Helsinki, Finland; Department of Otorhinolaryngology, Helsinki University Hospital, Helsinki, Finland.
Janne O KoskinenResearch and Development, ArcDia International Oy Ltd, Turku, Finland.
Riitta KorpelaDepartment of Pharmacology, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Kevin E EboigbodinResearch and Development, Orion Diagnostica Oy, P. O. BOX 83, FI-02101, Espoo, Finland. Electronic address: k.e.eboigbodin@gmail.com.
Orion Corporation (Finland) · FIUniversity of Helsinki · FIUniversity of Turku · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRhinovirus (RV), a major cause of respiratory infection in humans, imposes an enormous economic burden due to the direct and indirect costs associated with the illness. Accurate and timely diagnosis is crucial for deciding the appropriate clinical approach and minimizing unnecessary prescription of antibiotics. Diagnosis of RV is extremely challenging due to genetic and serological variability among its numerous types and their similarity to enteroviruses.

objectiveWe sought to develop a rapid nucleic acid test that can be used for the detection of Rhinovirus within both laboratory and near patient settings. STUDY

designWe developed and evaluated a novel isothermal nucleic acid amplification method called Reverse Transcription Strand Invasion-Based Amplification (RT-SIBA) to rapidly detect Rhinovirus from clinical specimens.

resultThe method, RT-SIBA, detected RV in clinical specimens with high analytical sensitivity (96%) and specificity (100%). The time to positive result was significantly shorter for the RV RT-SIBA assay than for a reference RV nucleic acid amplification method (RT-qPCR).

conclusionThe rapid detection time of the RV SIBA assay, as well as its compatibility with portable instruments, will facilitate prompt diagnosis of infection and thereby improve patient care.

Indexed as

Molecular Diagnostic TechniquesNucleic Acid Amplification TechniquesHumansPoint-of-Care SystemsReproducibility of ResultsRespiratory Tract InfectionsReverse Transcriptase Polymerase Chain ReactionRhinovirusRNA, ViralSensitivity and SpecificityRNA, ViralAmplificationDiagnosticsIsothermalPoint-of-careRhinovirusRT-SIBAVirus

Identifiers

PMID30347198
PMCPMC7113843
OpenAlexW2897283349

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.