Evidence map›Paper›PMID 30346954›Full record

ArticlePloS one2018

Cells respond to deletion of CAV1 by increasing synthesis of extracellular matrix.

C Mendoza-Topaz, G Nelson, G Howard, S Hafner, P Rademacher, M Frick, B J Nichols

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

C Mendoza-TopazMedical Research Council Laboratory of Molecular Biology, Cambridge, United Kingdom.
G NelsonMedical Research Council Laboratory of Molecular Biology, Cambridge, United Kingdom.ORCID 0000-0001-9825-4241
G HowardMedical Research Council Laboratory of Molecular Biology, Cambridge, United Kingdom.
S HafnerInstitute of Pathophysiological Anesthesiology and Process Engineering, University of Ulm, Ulm, Germany.
P RademacherInstitute of Pathophysiological Anesthesiology and Process Engineering, University of Ulm, Ulm, Germany.
M FrickInstitute of General Physiology, University of Ulm, Ulm, Germany.ORCID 0000-0002-4763-1104
B J NicholsMedical Research Council Laboratory of Molecular Biology, Cambridge, United Kingdom.ORCID 0000-0001-5392-7182
MRC Laboratory of Molecular Biology · GBUniversität Ulm · DE

Funding

British Heart Foundation PG/14/25/30726Medical Research Council MC_U105178778MRF_ MRF-109-0001-RG-TOPAZ
6 · The paper itself

Abstract

A range of cellular functions have been attributed to caveolae, flask-like invaginations of the plasma membrane. Here, we have used RNA-seq to achieve quantitative transcriptional profiling of primary embryonic fibroblasts from caveolin 1 knockout mice (CAV1-/- MEFs), and thereby to gain hypothesis-free insight into how these cells respond to the absence of caveolae. Components of the extracellular matrix were decisively over-represented within the set of genes displaying altered expression in CAV1-/- MEFs when compared to congenic wild-type controls. This was confirmed biochemically and by imaging for selected examples. Up-regulation of components of the extracellular matrix was also observed in a second cell line, NIH-3T3 cells genome edited to delete CAV1. Up-regulation of components of the extracellular matrix was detected in vivo by assessing collagen deposition and compliance of CAV1-/- lungs. We discuss the implications of these findings in terms of the cellular function of caveolae.

Indexed as

AnimalsCaveolaeCaveolin 1CollagenEmbryo, MammalianExtracellular MatrixExtracellular Matrix ProteinsFibroblastsGene EditingGene Expression ProfilingGene Expression RegulationHeterozygoteHomozygoteLungMiceMice, Inbred C57BLCav1 protein, mouseCaveolin 1CollagenExtracellular Matrix Proteins

Identifiers

PMID30346954
PMCPMC6197626
OpenAlexW2896648213

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.