Evidence map›Paper›PMID 30344523›Full record

ArticleFrontiers in immunology2018

Development of a Stable MGAT1

Rachel C Doran, Bin Yu, Meredith Wright, Sara M O'Rourke, Lu Yin, Jennie M Richardson, Gabriel Byrne, Kathryn A Mesa, Phillip W Berman

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Rachel C DoranDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
Bin YuDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
Meredith WrightDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
Sara M O'RourkeDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
Lu YinDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
Jennie M RichardsonDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
Gabriel ByrneDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
Kathryn A MesaDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
Phillip W BermanDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
University of California, Santa Cruz · US

Funding

Re-engineering gp120 to include glycan-dependent epitopesR01AI113893 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI BERMAN, PHILLIP WAYNE · 2014 to 2017
$4.2M
NIAID NIH HHS R01 AI113893
6 · The paper itself

Abstract

The high rate of new HIV infections, particularly in Sub-Saharan Africa, emphasizes the need for a safe and effective vaccine to prevent acquired immunodeficiency syndrome (AIDS). To date, the only HIV vaccine trial that has exhibited protective efficacy in humans was the RV144 study completed in Thailand. The finding that protection correlated with antibodies to gp120 suggested that increasing the quality or magnitude of the antibody response that recognize gp120 might improve the modest yet significant protection (31.2%) achieved with this immunization regimen. However, the large-scale production of rgp120 suitable for clinical trials has been challenging due, in part, to low productivity and difficulties in purification. Moreover, the antigens that are currently available were produced largely by the same technology used in the early 1990s and fail to incorporate unique carbohydrates presented on HIV virions required for the binding of several major families of broadly neutralizing antibodies (bNAbs). Here we describe the development of a high-yielding CHO cell line expressing rgp120 from a clade C isolate (TZ97008), representative of the predominant circulating HIV subtype in Southern Africa and Southeast Asia. This cell line, produced using robotic selection, expresses high levels (1.2 g/L) of the TZ97008 rgp120 antigen that incorporates oligomannose glycans required for binding to multiple glycan dependent bNAbs. The resulting rgp120 displays a lower degree of net charge and glycoform heterogeneity as compared to rgp120s produced in normal CHO cells. This homogeneity in net charge facilitates purification by filtration and ion exchange chromatography methods, eliminating the need for expensive custom-made lectin, or immunoaffinity columns. The results described herein document the availability of a novel cell line for the large-scale production of clade C gp120 for clinical trials. Finally, the strategy used to produce a TZ97008 gp120 in the MGAT

Indexed as

Amino Acid SequenceAnimalsAntibodies, NeutralizingCHO CellsCricetulusGenotypeGlycosylationHIV-1HIV AntibodiesHIV Envelope Protein gp120HIV InfectionsHumansN-AcetylglucosaminyltransferasesProtein BindingAntibodies, NeutralizingHIV AntibodiesHIV Envelope Protein gp120MGAT1 protein, humanN-Acetylglucosaminyltransferasescell lineClade Cglycosylationgp120HIVvaccine

Identifiers

PMID30344523
PMCPMC6182045
OpenAlexW2895341493

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.