Evidence map›Paper›PMID 30342302›Full record

ArticleVirology2019

Tumor suppressor Interferon Regulatory Factor 1 selectively blocks expression of endogenous retrovirus.

K P Stoltz, C N Jondle, K Pulakanti, P A Sylvester, R Urrutia, S Rao, V L Tarakanova

Open access · greenAbstract read
In one paragraph

Article in Virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

K P StoltzMicrobiology and Immunology Department, Medical College of Wisconsin, Milwaukee, Wisconsin, United States.
C N JondleMicrobiology and Immunology Department, Medical College of Wisconsin, Milwaukee, Wisconsin, United States.
K PulakantiBlood Research Institute, BloodCenter of Wisconsin, a Part of Versiti, 8727 West Watertown Plank Road, Milwaukee, WI 53226, United States.
P A SylvesterMicrobiology and Immunology Department, Medical College of Wisconsin, Milwaukee, Wisconsin, United States.
R UrrutiaCancer Center, Medical College of Wisconsin, Milwaukee, Wisconsin, United States; Department of Surgery, Medical College of Wisconsin, Milwaukee, Wisconsin, United States.
S RaoBlood Research Institute, BloodCenter of Wisconsin, a Part of Versiti, 8727 West Watertown Plank Road, Milwaukee, WI 53226, United States. Electronic address: sridhar.rao@bcw.edu.
V L TarakanovaMicrobiology and Immunology Department, Medical College of Wisconsin, Milwaukee, Wisconsin, United States; Cancer Center, Medical College of Wisconsin, Milwaukee, Wisconsin, United States. Electronic address: vera@mcw.edu.
Medical College of Wisconsin · USVersiti Blood Center of Wisconsin · US

Funding

ZINC FINGER GENES AND PANCREATIC CELL GROWTHR01DK052913 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI LOMBERK, GWEN, URRUTIA, RAUL A. · 1998 to 2023
$7.0M
IRF-1: a brake to limit gammaherpesvirus infection and pathogenesisR01CA203923 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI TARAKANOVA, VERA L. · 2017 to 2021
$2.0M
Cohesin Mutations in Acute Myelogenous LeukemiaR01CA204231 · NCI · VERSITI WISCONSIN, INC. · PI RAO, SRIDHAR · 2017 to 2021
$1.9M
ATM and gammaherpesvirus infection: a precarious balanceR01CA183593 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI TARAKANOVA, VERA L. · 2014 to 2018
$1.6M
NCI NIH HHS R01 CA183593NCI NIH HHS R01 CA203923NCI NIH HHS R01 CA204231NIDDK NIH HHS R01 DK052913
6 · The paper itself

Abstract

Endogenous retroviruses (ERVs) comprise 10% of the genome, with many of these transcriptionally silenced post early embryogenesis. Several stimuli, including exogenous virus infection and cellular transformation can reactivate ERV expression via a poorly understood mechanism. We identified Interferon Regulatory Factor 1 (IRF-1), a tumor suppressor and an antiviral host factor, as a suppressor of ERV expression. IRF-1 decreased expression of a specific mouse ERV in vitro and in vivo. IRF-3, but not IRF-7, also decreased expression of distinct ERV families, suggesting that suppression of ERVs is a relevant biological function of the IRF family. Given the emerging appreciation of the physiological relevance of ERV expression in cancer, IRF-1-mediated suppression of specific ERVs may contribute to the overall tumor suppressor activity of this host factor.

Indexed as

Gene Expression Regulation, ViralAnimalsCells, CulturedEndogenous RetrovirusesInterferon Regulatory Factor-1Interferon Regulatory Factor-3MiceMice, Inbred C57BLRNA-Directed DNA PolymeraseTumor Suppressor ProteinsInterferon Regulatory Factor-1Interferon Regulatory Factor-3Irf1 protein, mouseIrf3 protein, mouseRNA-Directed DNA PolymeraseTumor Suppressor ProteinsCancerEndogenous retroviruses, Interferon Regulatory Factor

Identifiers

PMID30342302
PMCPMC6875439
OpenAlexW2896864560

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.