Evidence map›Paper›PMID 30341988›Full record

ArticleChembiochem : a European journal of chemical biology2018

Coumarin Triazabutadienes for Fluorescent Labeling of Proteins.

Mehrdad Shadmehr, Garrett J Davis, Bereketab T Mehari, Stephanie M Jensen, John C Jewett

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Crystal structure and spectroscopic properties of (Acta crystallographica. Section E, Crystallographic communications · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mehrdad ShadmehrChemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA.
Garrett J DavisChemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA.
Bereketab T MehariChemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA.
Stephanie M JensenChemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA.
John C JewettChemistry and Biochemistry, University of Arizona, 1306 E. University Boulevard, Tucson, AZ, 85721, USA.ORCID 0000-0001-5822-4080
University of Arizona · US

Funding

CHEMISTRY-BIOLOGY INTERFACE TRAINING PROGRAMT32GM008804 · NIGMS · UNIVERSITY OF ARIZONA · PI MONTFORT, WILLIAM R. · 2003 to 2023
$3.9M
Radiation and Fluorescence Imaging Technology for Biology and BiochemistryS10OD013237 · OD · UNIVERSITY OF ARIZONA · PI PARK, CHAD KING · 2013 to 2013
$137k
NIGMS NIH HHS T32 GM008804NIH HHS S10 OD013237
6 · The paper itself

Abstract

The use of small-molecule fluorophores to label proteins with minimal perturbation in response to an external stimulus is a powerful tool to probe chemical and biochemical environments. Herein, we describe the use of a coumarin-modified triazabutadiene that can deliver aryl diazonium ions to fluorescently label proteins by tyrosine-selective modification. The labeling can be triggered by low-pH-induced liberation of the diazonium species, thus making the fluorophore especially useful in labeling biochemical surroundings such as those found within the late endosome. Additionally, we show that a variety of coumarin triazabutadienes might also be prone to releasing their diazonium cargo after irradiation with UV light.

Indexed as

CoumarinsFluorescenceFluorescent DyesMolecular ProbesProteinsTriazenesCoumarinsFluorescent DyesMolecular ProbesProteinsTriazeneselectrophilic substitutionfluorescent probesprotecting groupsprotein modificationssubstituent effects

Identifiers

PMID30341988
PMCPMC6457986
OpenAlexW2896687853

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.