Evidence map›Paper›PMID 30341592›Full record

ArticleClinical oral investigations2019

Functional variant of CHI3L1 gene is associated with neck metastasis in oral cancer.

Chun-Wen Su, Mu-Kuan Chen, Wei-Chen Hung, Shun-Fa Yang, Chun-Yi Chuang, Chiao-Wen Lin

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Article in Clinical oral investigations, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  9. Involvement of FGFR4 Gene Variants on the Clinicopathological Severity in Urothelial Cell Carcinoma.International journal of environmental research and public health · 2019
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4 · The record

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5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Chun-Wen SuInstitute of Medicine, Chung Shan Medical University, Taichung, Taiwan.
Mu-Kuan ChenInstitute of Medicine, Chung Shan Medical University, Taichung, Taiwan.
Wei-Chen HungInstitute of Medicine, Chung Shan Medical University, Taichung, Taiwan.
Shun-Fa YangInstitute of Medicine, Chung Shan Medical University, Taichung, Taiwan.
Chun-Yi ChuangSchool of Medicine, Chung Shan Medical University, 110 Chien-Kuo N. Road, Section 1, Taichung, 402, Taiwan. cyi4602@gmail.com.
Chiao-Wen LinInstitute of Oral Sciences, Chung Shan Medical University, 110 Chien-Kuo N. Road, Section 1, Taichung, 402, Taiwan. cwlin@csmu.edu.tw.
Chung Shan Medical University · TWChanghua Christian Hospital · TWChung Shan Medical University Hospital · TW

Funding

Chung Shan Medical University Hospital CSH-2018-D-005
6 · The paper itself

Abstract

objectivesOral cancer is the most common head and neck malignancy, and it is associated with a high recurrence rate and lymph node metastasis potential. YKL-40, also known as chitinase-3-like protein 1 (CHI3L1), is a secreted glycoprotein that serves as a biomarker in several diseases. It also plays a crucial role in regulating many characteristics of cancer, such as cell growth, migration, anti-apoptosis, and angiogenesis. Accumulating evidence supports the link between single-nucleotide polymorphisms (SNPs) and oral cancer, but no report on the association between CHI3L1 polymorphisms and oral cancer is available. Thus, the present study evaluated the contribution of CHI3L1 SNPs to oral cancer susceptibility and clinicopathology. MATERIALS AND

methodsThis study recruited a total of 2362 subjects, comprising 1190 healthy male controls and 1172 male patients with oral cancer. Allelic discrimination of the CHI3L1 polymorphisms - 1371 G>A (rs6691378), - 247 G>A (rs10399805), - 131 C>G (rs4950928), and + 2950 T>C (rs880633) was assessed through real-time polymerase chain reaction.

resultsWe detected a significant association of rs10399805 and rs6691378 with the risk of oral cancer (AOR, 1.537; 95% CI, 1.089-2.168; p = 0.014; AOR, 1.561; 95% CI, 1.131-2.156; p = 0.007, respectively) after adjustment for three potential confounders, smoking, betel nut chewing, and alcohol consumption. Moreover, we found that oral cancer patients carrying the homozygous A/A genotype of the rs10399805 (p = 0.035) or rs6691378 polymorphism (p = 0.023) showed a significantly lower risk of lymph node metastasis. Moreover, according to the Genotype-Tissue Expression database, the rs10399805 and rs6691378 polymorphisms in the promoter region were associated with decreased levels of CHI3L1 mRNA.

conclusionsIn conclusion, we found that the homozygous mutant allele of rs10399805 and rs6691378 appeared to have significantly lower risk of lymph node metastasis and associated with its mRNA levels in oral cancer. CLINICAL RELEVANCE: The CHI3L1 polymorphisms rs10399805 and rs6691378 may act as biomarkers for predicting lymph node metastasis in oral cancer patients.

Indexed as

Polymorphism, Single NucleotideAllelesBiomarkers, TumorCase-Control StudiesChitinase-3-Like Protein 1Genetic Predisposition to DiseaseGenotypeGlycoproteinsHumansLymphatic MetastasisMaleMiddle AgedMouth NeoplasmsBiomarkers, TumorCHI3L1 protein, humanChitinase-3-Like Protein 1GlycoproteinsCHI3L1Lymph node metastasisOral cancerSingle-nucleotide polymorphism

Identifiers

PMID30341592
OpenAlexW2897744273

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.