Evidence map›Paper›PMID 30340409›Full record

ArticleMolecules (Basel, Switzerland)2018

Abnormal Anionic Porphyrin Sensing Effect for HER2 Gene Related DNA Detection via Impedance Difference between MWCNTs and Single-Stranded DNA or Double-Stranded DNA.

Jingheng Ning, Long Liu, Xin Luo, Min Wang, Donglin Liu, Rong Hou, Donger Chen, Jianhui Wang

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 7 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jingheng NingSchool of Chemistry and Biological Engineering, Changsha University of Science & Technology, Changsha 410110, China. jinghengning@csust.edu.cn.
Long LiuSchool of Chemistry and Biological Engineering, Changsha University of Science & Technology, Changsha 410110, China. liulong_0808@163.com.
Xin LuoSchool of Chemistry and Biological Engineering, Changsha University of Science & Technology, Changsha 410110, China. luoxin_gl@126.com.
Min WangSchool of Chemistry and Biological Engineering, Changsha University of Science & Technology, Changsha 410110, China. wang_min1993@126.com.
Donglin LiuSchool of Chemistry and Biological Engineering, Changsha University of Science & Technology, Changsha 410110, China. dong993@163.com.
Rong HouSchool of Chemistry and Biological Engineering, Changsha University of Science & Technology, Changsha 410110, China. hourong0406@163.com.
Donger ChenSchool of Chemistry and Biological Engineering, Changsha University of Science & Technology, Changsha 410110, China. chendonger9@163.com.
Jianhui WangSchool of Chemistry and Biological Engineering, Changsha University of Science & Technology, Changsha 410110, China. wangjh0909@csust.edu.cn.
Changsha University of Science and Technology · CN

Funding

The work was supported by the National Natural Science Foundation of China (No. 21505005, 31527803 and 21545010), the National Key R&D Program of China (2017YFC1600306), Natural Science Foundation of Hunan Province (No. 2018JJ2424) and the Huxiang Youth t No. 21505005, 31527803 and 21545010;2017YFC1600306;No. 2018JJ2424;2015RS4051
6 · The paper itself

Abstract

Human epidermal growth factor receptor 2 (HER2) is a key tumor marker for several common and deadly cancers. It is of great importance to develop efficient detection methods for its over-expression. In this work, an electrochemical impedance spectroscopy (EIS) method adjustable by anionic porphyrin for HER2 gene detection has been proposed, based on the impedance difference between multi-walled carbon nanotubes (MWCNTs) and DNA. The interesting finding herein is that with the addition of anionic porphyrin, i.e., meso-tetra(4-sulfophenyl)-porphyrin (TSPP), the impedance value obtained at a glass carbon electrode (GCE) modified with MWCNTs and a single stranded DNA (ssDNA), the probe DNA that might be assembled tightly onto MWCNTs through π-π stacking interaction, gets a slight decrease; however, the impedance value from a GCE modified with MWCNTs and a double stranded DNA (dsDNA), the hybrid of the probe DNA with a target DNA, which might be assembled loosely onto MWCNTs for the screening effect of phosphate backbones in dsDNA, gets an obvious decrease. The reason may be that on the one hand, being rich in negative sulfonate groups, TSPP will try to push DNA far away from CNTs surface due to its strong electrostatic repulsion towards DNA; on the other hand, rich in planar phenyl or pyrrole rings, TSPP will compete with DNA for the surface of CNTs since it can also be assembled onto CNTs through conjugative interactions. In this way, the "loosely assembled" dsDNA will be repelled by this anionic porphyrin and released off CNTs surface much more than the "tightly assembled" ssDNA, leading to a bigger difference in the impedance value between dsDNA and ssDNA. Thus, through the amplification effect of TSPP on the impedance difference, the perfectly matched target DNA could be easily determined by EIS without any label. Under the optimized experimental conditions, this electrochemical sensor shows an excellent linear response to target DNA in a concentration range of 2.0 × 10

Indexed as

Biosensing TechniquesAnionsDielectric SpectroscopyDNA, Single-StrandedErb-b2 Receptor Tyrosine KinasesHumansLimit of DetectionNanotubes, CarbonNeoplasmsPorphyrinsAnionsDNA, Single-StrandedERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesNanotubes, CarbonPorphyrinsanionic porphyrinbioanalysisDNA sensorelectrochemical impedance spectroscopyHER2 gene

Identifiers

PMID30340409
PMCPMC6222431
OpenAlexW2896836099

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.