Evidence map›Paper›PMID 30340325›Full record

ArticleInternational journal of molecular sciences2018

Homology Model and Docking-Based Virtual Screening for Ligands of Human Dyskerin as New Inhibitors of Telomerase for Cancer Treatment.

Romina Gabriela Armando, Diego Luis Mengual Gómez, Ezequiel Ivan Juritz, Pablo Lorenzano Menna, Daniel Eduardo Gomez

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Oncology reports · 2022
    Article
  10. The Key Role of RNA Modification in Breast Cancer.Frontiers in cell and developmental biology · 2022
    Review
  11. The role of mMolecular cancer · 2021
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Romina Gabriela ArmandoLaboratory of Molecular Oncology, Department of Science and Technology, Quilmes National University, Buenos Aires B1876BXD, Argentina. romina.armando@unq.edu.ar.
Diego Luis Mengual GómezLaboratory of Molecular Oncology, Department of Science and Technology, Quilmes National University, Buenos Aires B1876BXD, Argentina. diego.mengualgomez@unq.edu.ar.ORCID 0000-0002-6088-3816
Ezequiel Ivan JuritzCenter for Bioinformatics and Integrative Biology, Facultad de Ciencias de la Vida, Universidad Andrés Bello, Santiago 8370146, Chile. ejuritz@gmail.com.
Pablo Lorenzano MennaLaboratory of Molecular Pharmacology, Department of Science and Technology, Quilmes National University, Buenos Aires B1876BXD, Argentina. plmenna@unq.edu.ar.
Daniel Eduardo GomezLaboratory of Molecular Oncology, Department of Science and Technology, Quilmes National University, Buenos Aires B1876BXD, Argentina. degomez@unq.edu.ar.ORCID 0000-0002-8629-0787
National University of Quilmes · AR

Funding

Universidad Nacional de Quilmes PUNQ 1398/15
6 · The paper itself

Abstract

Immortality is one of the main features of cancer cells. Tumor cells have an unlimited replicative potential, principally due to the holoenzyme telomerase. Telomerase is composed mainly by dyskerin (DKC1), a catalytic retrotranscriptase (hTERT) and an RNA template (hTR). The aim of this work is to develop new inhibitors of telomerase, selecting the interaction between hTR⁻DKC1 as a target. We designed two models of the human protein DKC1: homology and ab initio. These models were evaluated by different procedures, revealing that the homology model parameters were the most accurate. We selected two hydrophobic pockets contained in the PUA (pseudouridine synthase and archaeosine transglycosylase) domain, using structural and stability analysis. We carried out a docking-based virtual screen on these pockets, using the reported mutation K314 as the center of the docking. The hDKC1 model was tested against a library of 450,000 drug-like molecules. We selected the first 10 molecules that showed the highest affinity values to test their inhibitory activity on the cell line MDA MB 231 (Monroe Dunaway Anderson Metastasis Breast cancer 231), obtaining three compounds that showed inhibitory effect. These results allowed us to validate our design and set the basis to continue with the study of telomerase inhibitors for cancer treatment.

Indexed as

Molecular Docking SimulationMolecular Dynamics SimulationAmino AcidsAntineoplastic AgentsCell Cycle ProteinsDrug DiscoveryEnzyme InhibitorsFungal ProteinsHumansHydrophobic and Hydrophilic InteractionsLigandsMolecular ConformationMutationNuclear ProteinsProtein BindingReproducibility of ResultsAmino AcidsAntineoplastic AgentsCell Cycle ProteinsDKC1 protein, humanEnzyme InhibitorsFungal ProteinsLigandsNuclear ProteinsTelomerasecancerDKC1hTRinhibitorstelomerase

Identifiers

PMID30340325
PMCPMC6214037
OpenAlexW2896803819

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.