Evidence map›Paper›PMID 30338209›Full record

ArticleFEBS open bio2018

Protein responses in kenaf plants exposed to drought conditions determined using iTRAQ technology.

Xia An, Guanrong Jin, Jingyu Zhang, Xiahong Luo, Changli Chen, Wenlue Li, GuangYing Ma, Liang Jin, Lunjin Dai, Xiaohua Shi and 2 more

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Xia AnZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
Guanrong JinZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
Jingyu ZhangKey Laboratory of Crop Ecophysiology and Farming Systems in the Middle Reaches of the Yangtze River Ministry of Agriculture Wuhan China.
Xiahong LuoZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
Changli ChenZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
Wenlue LiZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
GuangYing MaZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
Liang JinZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
Lunjin DaiKey Laboratory of Crop Ecophysiology and Farming Systems in the Middle Reaches of the Yangtze River Ministry of Agriculture Wuhan China.
Xiaohua ShiZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
Wei WeiKey Laboratory of Crop Ecophysiology and Farming Systems in the Middle Reaches of the Yangtze River Ministry of Agriculture Wuhan China.
Guanlin ZhuZhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Flower Research and Development Centre Zhejiang Academy of Agricultural Sciences Hangzhou China.
ZheJiang Academy of Agricultural Sciences · CNHuazhong Agricultural University · CNMinistry of Agriculture · ID

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The molecular mechanisms that underlie drought stress responses in kenaf, an important crop for the production of natural fibers, are poorly understood. To address this issue, we describe here the first iTRAQ-based comparative proteomic analysis of kenaf seedlings. Plants were divided into the following three treatment groups: Group A, watered normally (control); Group B, not watered for 6 days (drought treatment); and Group C, not watered for 5 days and then rewatered for 1 day (recovery treatment). A total of 5014 proteins were detected, including 4932 (i.e., 98.36%) that were matched to known proteins in a BLAST search. We detected 218, 107, and 348 proteins that were upregulated in Group B compared with Group A, Group C compared with Group A, and Group B compared with Group C, respectively. Additionally, 306, 145, and 231 downregulated proteins were detected during the same comparisons. Seventy differentially expressed proteins were analyzed and classified into 10 categories: photosynthesis, sulfur metabolism, amino sugar and nucleotide sugar metabolism, oxidative phosphorylation, ribosome, fatty acid elongation, thiamine metabolism, tryptophan metabolism, plant-pathogen interaction, and propanoate. Kenaf adapted to stress mainly by improving the metabolism of ATP, regulating photosynthesis according to light intensity, promoting the synthesis of osmoregulators, strengthening ion transport signal transmission, and promoting metabolism and cell stability. This is the first study to examine changes in protein expression in kenaf plants exposed to drought stress. Our results identified key drought-responsive genes and proteins and may provide useful genetic information for improving kenaf stress resistance.

Indexed as

comparative proteomic analysisdrought stressiTRAQkenafstress resistance

Identifiers

PMID30338209
PMCPMC6168693
OpenAlexW2887415148

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.