Evidence map›Paper›PMID 30337934›Full record

ArticleFrontiers in plant science2018

Ectopic Transplastomic Expression of a Synthetic MatK Gene Leads to Cotyledon-Specific Leaf Variegation.

Yujiao Qu, Julia Legen, Jürgen Arndt, Stephanie Henkel, Galina Hoppe, Christopher Thieme, Giovanna Ranzini, Jose M Muino, Andreas Weihe, Uwe Ohler and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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  7. EndophyticFrontiers in microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Yujiao QuInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Julia LegenInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Jürgen ArndtInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Stephanie HenkelInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Galina HoppeInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Christopher ThiemeInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Giovanna RanziniInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Jose M MuinoInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Andreas WeiheInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Uwe OhlerComputational Regulatory Genomics, Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.
Gert WeberInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Oren OstersetzerDepartment of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel.
Christian Schmitz-LinneweberInstitut für Biologie, Humboldt-Universität zu Berlin, Berlin, Germany.
Humboldt-Universität zu Berlin · DEHebrew University of Jerusalem · ILHelmholtz-Zentrum Berlin für Materialien und Energie · DEMax Delbrück Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chloroplasts (and other plastids) harbor their own genetic material, with a bacterial-like gene-expression systems. Chloroplast RNA metabolism is complex and is predominantly mediated by nuclear-encoded RNA-binding proteins. In addition to these nuclear factors, the chloroplast-encoded intron maturase MatK has been suggested to perform as a splicing factor for a subset of chloroplast introns. MatK is essential for plant cell survival in tobacco, and thus null mutants have not yet been isolated. We therefore attempted to over-express MatK from a neutral site in the chloroplast, placing it under the control of a theophylline-inducible riboswitch. This ectopic insertion of MatK lead to a variegated cotyledons phenotype. The addition of the inducer theophylline exacerbated the phenotype in a concentration-dependent manner. The extent of variegation was further modulated by light, sucrose and spectinomycin, suggesting that the function of MatK is intertwined with photosynthesis and plastid translation. Inhibiting translation in the transplastomic lines has a profound effect on the accumulation of several chloroplast mRNAs, including the accumulation of an RNA antisense to

Indexed as

chloroplastMatKNicotiana tabacumsplicingtransplastomicvariegation

Identifiers

PMID30337934
PMCPMC6180158
OpenAlexW2890796974

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.