Evidence map›Paper›PMID 30337906›Full record

ArticleFrontiers in microbiology2018

Metagenomics of Coral Reefs Under Phase Shift and High Hydrodynamics.

Pedro Milet Meirelles, Ana Carolina Soares, Louisi Oliveira, Luciana Leomil, Luciana Reis Appolinario, Ronaldo Bastos Francini-Filho, Rodrigo Leão de Moura, Renato Tenan de Barros Almeida, Paulo S Salomon, Gilberto Menezes Amado-Filho and 8 more

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Pedro Milet MeirellesInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Ana Carolina SoaresInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Louisi OliveiraInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Luciana LeomilInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Luciana Reis AppolinarioInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Ronaldo Bastos Francini-FilhoDepartment of Environment and Engineering, Federal University of Paraíba, Rio Tinto, Brazil.
Rodrigo Leão de MouraInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Renato Tenan de Barros AlmeidaInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Paulo S SalomonInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Gilberto Menezes Amado-FilhoRio de Janeiro Botanical Garden Research Institute (IP-JBRJ), Rio de Janeiro, Brazil.
Ricardo KrugerDepartment of Cellular Biology, University of Brasília, Brasília, Brazil.
Eduardo SiegleOceanographic Institute, University of São Paulo, São Paulo, Brazil.
Diogo A TschoekeInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Isao KudoGraduate School of Environmental Science, Hokkaido University, Sapporo, Japan.
Sayaka MinoLaboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.
Tomoo SawabeLaboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.
Cristiane C ThompsonInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Fabiano L ThompsonInstitute of Biology and SAGE-COPPE, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Local and global stressors have affected coral reef ecosystems worldwide. Switches from coral to algal dominance states and microbialization are the major processes underlying the global decline of coral reefs. However, most of the knowledge concerning microbialization has not considered physical disturbances (e.g., typhoons, waves, and currents). Southern Japan reef systems have developed under extreme physical disturbances. Here, we present analyses of a three-year investigation on the coral reefs of Ishigaki Island that comprised benthic and fish surveys, water quality analyses, metagenomics and microbial abundance data. At the four studied sites, inorganic nutrient concentrations were high and exceeded eutrophication thresholds. The dissolved organic carbon (DOC) concentration (up to 233.3 μM) and microbial abundance (up to 2.5 × 10

Indexed as

coral reefsearly warning signalshydrodynamicslocal stressorsmetagenomicsmicrobializationresistence

Identifiers

PMID30337906
PMCPMC6180206

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.