Evidence map›Paper›PMID 30337588›Full record

ArticleScientific reports2018

Genomic analysis of Acinetobacter baumannii prophages reveals remarkable diversity and suggests profound impact on bacterial virulence and fitness.

Ana Rita Costa, Rodrigo Monteiro, Joana Azeredo

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Prophage: agent provocateur?Archives of microbiology · 2026
    Review
  5. Carbapenem-ResistantMicroorganisms · 2025
    Review
  6. Article
  7. Article
  8. Exploring Viral Interactions inLife (Basel, Switzerland) · 2025
    Article
  9. Review
  10. Article
  11. Genomic analysis of prophages in 44 clinical strains ofFrontiers in cellular and infection microbiology · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Characterization and Diversity ofInternational journal of molecular sciences · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ana Rita CostaCEB - Centre of Biological Engineering, University of Minho, 4710-057, Braga, Portugal.
Rodrigo MonteiroCEB - Centre of Biological Engineering, University of Minho, 4710-057, Braga, Portugal.ORCID http://orcid.org/0000-0003-2312-3989
Joana AzeredoCEB - Centre of Biological Engineering, University of Minho, 4710-057, Braga, Portugal. jazeredo@deb.uminho.pt.

Funding

Ministry of Education and Science | Fundação para a Ciência e a Tecnologia (Portuguese Science and Technology Foundation) POCI-01-0145-FEDER-006684Ministry of Education and Science | Fundação para a Ciência e a Tecnologia (Portuguese Science and Technology Foundation) PTDC/BBB-BSS/6471/2014Ministry of Education and Science | Fundação para a Ciência e a Tecnologia (Portuguese Science and Technology Foundation) SFRH/BPD/94648/2013Ministry of Education and Science | Fundação para a Ciência e a Tecnologia (Portuguese Science and Technology Foundation) UID/BIO/04469/2013
6 · The paper itself

Abstract

The recent nomination by the World Health Organization of Acinetobacter baumannii as the number one priority pathogen for the development of new antibiotics is a direct consequence of its fast evolution of pathogenicity, and in particular of multidrug resistance. While the development of new antibiotics is critical, understanding the mechanisms behind the crescent bacterial antibiotic resistance is equally relevant. Often, resistance and other bacterial virulence elements are contained on highly mobile pieces of DNA that can easily spread to other bacteria. Prophages are one of the mediators of this form of gene transfer, and have been frequently found in bacterial genomes, often offering advantageous features to the host. Here we assess the contribution of prophages for the evolution of A. baumannii pathogenicity. We found prophages to be notably diverse and widely disseminated in A. baumannii genomes. Also remarkably, A. baumannii prophages encode for multiple putative virulence factors that may be implicated in the bacterium's capacity to colonize host niches, evade the host immune system, subsist in unfavorable environments, and tolerate antibiotics. Overall our results point towards a significant contribution of prophages for the dissemination and evolution of pathogenicity in A. baumannii, and highlight their clinical relevance.

Indexed as

Genetic VariationAcinetobacter baumanniiBacterial ProteinsDrug Resistance, BacterialGenetic FitnessGenome, BacterialGenome SizeGenome, ViralHost-Pathogen InteractionsInterspersed Repetitive SequencesProphagesProteomeVirulenceBacterial ProteinsProteome

Identifiers

PMID30337588
PMCPMC6193963

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.