Evidence map›Paper›PMID 30337586›Full record

ArticleNature communications2018

A RNA producing DNA hydrogel as a platform for a high performance RNA interference system.

Jaejung Song, Minhyuk Lee, Taeyoung Kim, Jeongkyeong Na, Yebin Jung, Gyoo Yeol Jung, Sungjee Kim, Nokyoung Park

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 71 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Dynamic Covalent Hydrogels: Strong yet Dynamic.Gels (Basel, Switzerland) · 2022
    Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Development, Preparation, and Biomedical Applications of DNA-Based Hydrogels.Frontiers in bioengineering and biotechnology · 2021
    Review
  16. Review
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jaejung SongSchool of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology (POSTECH), 77 Cheongam Ro, Nam Gu, 37673, Pohang, South Korea.ORCID http://orcid.org/0000-0001-5080-1250
Minhyuk LeeDepartment of Chemistry, Myongji University, 116 Myongji Ro, Yongin, 17058, Gyeonggi-do, South Korea.
Taeyoung KimDepartment of Chemistry, Myongji University, 116 Myongji Ro, Yongin, 17058, Gyeonggi-do, South Korea.
Jeongkyeong NaDepartment of Chemical Engineering, POSTECH, 77 Cheongam Ro, Nam Gu, 37673, Pohang, South Korea.
Yebin JungDepartment of Chemistry, POSTECH, 77 Cheongam Ro, Nam Gu, 37673, Pohang, South Korea.
Gyoo Yeol JungSchool of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology (POSTECH), 77 Cheongam Ro, Nam Gu, 37673, Pohang, South Korea.ORCID http://orcid.org/0000-0002-9742-3207
Sungjee KimSchool of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology (POSTECH), 77 Cheongam Ro, Nam Gu, 37673, Pohang, South Korea.
Nokyoung ParkDepartment of Chemistry, Myongji University, 116 Myongji Ro, Yongin, 17058, Gyeonggi-do, South Korea. pospnk@mju.ac.kr.
Pohang University of Science and Technology · KRMyongji University · KR

Funding

Ministry of Knowledge Economy | Korea Institute of Energy Technology Evaluation and Planning (KETEP) No. 20174010201160National Research Foundation of Korea (NRF) NRF-2015R1A2A2A04005445
6 · The paper itself

Abstract

RNA interference (RNAi) is a mechanism in which small interfering RNA (siRNA) silences a target gene. Herein, we describe a DNA hydrogel capable of producing siRNA and interfering with protein expression. This RNAi-exhibiting gel (termed I-gel for interfering gel) consists of a plasmid carrying the gene transcribing siRNA against the target mRNA as part of the gel scaffold. The RNAi efficiency of the I-gel has been confirmed by green fluorescent protein (GFP) expression assay and RNA production quantification. The plasmid stability in the I-gel results in an 8-times higher transcription efficiency than that of the free plasmid. We further applied the I-gel to live cells and confirmed its effect in interfering with the GFP expression. The I-gel shows higher RNAi effect than plasmids in free form or complexed with Lipofectamine. This nanoscale hydrogel, which is able to produce RNA in a cell, provides a platform technology for efficient RNAi system.

Indexed as

RNA InterferenceAnimalsDNADogsHeLa CellsHumansHydrogelsMadin Darby Canine Kidney CellsRNARNA, Small InterferingDNAHydrogelsRNARNA, Small Interfering

Identifiers

PMID30337586
PMCPMC6193956
OpenAlexW2897755914

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.