Evidence map›Paper›PMID 30337452›Full record

ArticlePlant physiology2019

Parts-Prospecting for a High-Efficiency Thiamin Thiazole Biosynthesis Pathway.

Jiayi Sun, Cindy L Sigler, Guillaume A W Beaudoin, Jaya Joshi, Jenelle A Patterson, Keun H Cho, Maria A Ralat, Jesse F Gregory, David G Clark, Zhanao Deng and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Natural Variation in Vitamin BFrontiers in plant science · 2022
    Article
  7. Frontiers in plant science · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. The number of catalytic cycles in an enzyme's lifetime and why it matters to metabolic engineering.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  12. Article
  13. The importance of thiamine (vitamin BThe Journal of biological chemistry · 2020
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Jiayi SunHorticultural Sciences Department, University of Florida, Gainesville, Florida 32611.
Cindy L SiglerDepartment of Environmental Horticulture, University of Florida, Gainesville, Florida 32611.
Guillaume A W BeaudoinHorticultural Sciences Department, University of Florida, Gainesville, Florida 32611.
Jaya JoshiHorticultural Sciences Department, University of Florida, Gainesville, Florida 32611.
Jenelle A PattersonHorticultural Sciences Department, University of Florida, Gainesville, Florida 32611.
Keun H ChoDepartment of Environmental Horticulture, University of Florida, Gainesville, Florida 32611.
Maria A RalatDepartment of Food Science and Human Nutrition, University of Florida, Gainesville, Florida 32611.ORCID 0000-0003-1842-0102
Jesse F GregoryDepartment of Food Science and Human Nutrition, University of Florida, Gainesville, Florida 32611.
David G ClarkDepartment of Environmental Horticulture, University of Florida, Gainesville, Florida 32611.ORCID 0000-0002-6877-2547
Zhanao DengGulf Coast Research and Education Center, Department of Environmental Horticulture, University of Florida, Wimauma, Florida 33598.ORCID 0000-0002-7338-3298
Thomas A ColquhounDepartment of Environmental Horticulture, University of Florida, Gainesville, Florida 32611.
Andrew D HansonHorticultural Sciences Department, University of Florida, Gainesville, Florida 32611 adha@ufl.edu.ORCID 0000-0003-2585-9340
University of Florida · USFlorida Gulf Coast University · US

Funding

Acquisition of a Q Exactive HF Hybrid Quadrupole-OrbitrapS10OD021758 · OD · UNIVERSITY OF FLORIDA · PI BASSO, KARI B · 2017 to 2017
$600k
NIH HHS S10 OD021758
6 · The paper itself

Abstract

Plants synthesize the thiazole precursor of thiamin (cThz-P) via THIAMIN4 (THI4), a suicide enzyme that mediates one reaction cycle and must then be degraded and resynthesized. It has been estimated that this THI4 turnover consumes 2% to 12% of the maintenance energy budget and that installing an energy-efficient alternative pathway could substantially increase crop yield potential. Available data point to two natural alternatives to the suicidal THI4 pathway: (i) nonsuicidal prokaryotic THI4s that lack the active-site Cys residue on which suicide activity depends, and (ii) an uncharacterized thiazole synthesis pathway in flowers of the tropical arum lily

Indexed as

AraceaeBacteriaBacterial ProteinsBiosynthetic PathwaysEscherichia coliMetabolic EngineeringMethanococcusPlantsThiamineThiazolesBacterial ProteinsThiamineThiazoles

Identifiers

PMID30337452
PMCPMC6393793
OpenAlexW2895787128

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.