Evidence map›Paper›PMID 30337375›Full record

ArticleDevelopment (Cambridge, England)2018

Comparative genomic analysis of embryonic, lineage-converted and stem cell-derived motor neurons.

Justin K Ichida, Kim A Staats, Brandi N Davis-Dusenbery, Kendell Clement, Kate E Galloway, Kimberly N Babos, Yingxiao Shi, Esther Y Son, Evangelos Kiskinis, Nicholas Atwater and 4 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Development (Cambridge, England), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
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  7. Neuromuscular disease modeling on a chip.Disease models & mechanisms · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Justin K IchidaHarvard Stem Cell Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA ichida@usc.edu meissner@molgen.mpg.de eggan@mcb.harvard.edu.ORCID 0000-0002-8827-8087
Kim A StaatsDepartment of Stem Cell Biology and Regenerative Medicine, University of Southern California, Los Angeles, CA 90033, USA.ORCID 0000-0001-8392-7992
Brandi N Davis-DusenberyHarvard Stem Cell Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Kendell ClementHarvard Stem Cell Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.ORCID 0000-0003-3808-0811
Kate E GallowayDepartment of Stem Cell Biology and Regenerative Medicine, University of Southern California, Los Angeles, CA 90033, USA.
Kimberly N BabosDepartment of Stem Cell Biology and Regenerative Medicine, University of Southern California, Los Angeles, CA 90033, USA.
Yingxiao ShiDepartment of Stem Cell Biology and Regenerative Medicine, University of Southern California, Los Angeles, CA 90033, USA.
Esther Y SonHarvard Stem Cell Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Evangelos KiskinisHarvard Stem Cell Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Nicholas AtwaterHarvard Stem Cell Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Hongcang GuBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Andreas GnirkeBroad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Alexander MeissnerHarvard Stem Cell Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA ichida@usc.edu meissner@molgen.mpg.de eggan@mcb.harvard.edu.ORCID 0000-0001-8646-7469
Kevin EgganHarvard Stem Cell Institute, Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA ichida@usc.edu meissner@molgen.mpg.de eggan@mcb.harvard.edu.ORCID 0000-0003-4436-8467
Howard Hughes Medical Institute · USUniversity of Southern California · USBroad Institute · US

Funding

Regulatory Roles and Dynamics of Nuclear long-noncoding RNAs in PluripotencyP01GM099117 · NIGMS · HARVARD UNIVERSITY · PI RINN, JOHN LOUIS · 2011 to 2021
$21.2M
Center for Cell CircuitsP50HG006193 · NHGRI · BROAD INSTITUTE, INC. · PI REGEV, AVIV · 2011 to 2015
$15.6M
UW Center for Mendelian GenomicsUM1HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, LEAL, SUZANNE M · 2016 to 2020
$15.3M
Validating Secretory Autophagy as a Therapeutic Strategy for Diverse Forms of ALS and FTDR01NS097850 · NINDS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ICHIDA, JUSTIN KAWIKA · 2016 to 2024
$5.5M
Training in Hearing & Communication NeuroscienceT32DC009975 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Christopher A Shera · 2009 to 2026
$5.0M
NHGRI Genome Sequencing Program Coordinating CenterU24HG008956 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI BUYSKE, STEVEN G, MATISE, TARA C. · 2016 to 2020
$4.9M
Lineage reprogramming for hearing loss: development of drug screening and gene therapy approachesR01DC015530 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ICHIDA, JUSTIN KAWIKA, MCMAHON, ANDREW P. · 2016 to 2020
$3.0M
Generation and characterization of tools for target-specific de novo DNA methylatR01DA036898 · NIDA · HARVARD UNIVERSITY · PI MEISSNER, ALEXANDER · 2013 to 2017
$1.7M
Reprogramming using small moleculesR01GM096067 · NIGMS · HARVARD UNIVERSITY · PI EGGAN, KEVIN C · 2012 to 2015
$1.2M
Conversion of Fibroblasts to fxnal Spinal Motor Neurons Using Defined FactorR00NS077435 · NINDS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ICHIDA, JUSTIN KAWIKA · 2013 to 2015
$737k
HiSeq X SequencerS10OD021553 · OD · UNIVERSITY OF WASHINGTON · PI NICKERSON, DEBORAH A · 2016 to 2016
$600k
Conversion of fibroblasts to functional spinal motor neurons using defined factorK99NS077435 · NINDS · HARVARD UNIVERSITY · PI ICHIDA, JUSTIN KAWIKA · 2011 to 2012
$177k
NHGRI NIH HHS P50 HG006193NHGRI NIH HHS UM1 HG006493NIDA NIH HHS R01 DA036898NIDCD NIH HHS R01 DC015530NIDCD NIH HHS T32 DC009975NIGMS NIH HHS P01 GM099117NIGMS NIH HHS R01 GM096067NIH HHS S10 OD021553NINDS NIH HHS K99 NS077435NINDS NIH HHS R00 NS077435NINDS NIH HHS R01 NS097850
6 · The paper itself

Abstract

Advances in stem cell science allow the production of different cell types

Indexed as

GenomicsAnimalsCell LineageEmbryo, MammalianEpigenesis, GeneticMice, Inbred C57BLMotor NeuronsPluripotent Stem CellsTranscription, GeneticDirected differentiationEmbryonic stem cellsiPS cellLineage conversionMotor neuronReprogramming

Identifiers

PMID30337375
PMCPMC6262794
OpenAlexW2896276037

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.