Evidence map›Paper›PMID 30334394›Full record

ArticleJournal of biomedical optics2018

Method to identify and minimize artifacts induced by fluorescent impurities in single-molecule localization microscopy.

Janel L Davis, Biqin Dong, Cheng Sun, Hao F Zhang

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  8. Article
  9. Single-molecule localization microscopy.Nature reviews. Methods primers · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Janel L DavisNorthwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States.
Biqin DongNorthwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States.
Cheng SunNorthwestern University, Department of Mechanical Engineering, Evanston, Illinois, United States.
Hao F ZhangNorthwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States.

Funding

Developing Capacity to Evaluate Training Programs via Development of Human, Institutional and Social CapitalT32GM008449 · NIGMS · NORTHWESTERN UNIVERSITY · PI LEONARD, JOSHUA NATHANIEL · 1993 to 2023
$7.8M
NIGMS NIH HHS T32 GM008449
6 · The paper itself

Abstract

The existence of fluorescent impurities has been a long-standing obstacle in single-molecule imaging, which results in sample misidentification and higher localization uncertainty. Spectroscopic single-molecule localization microscopy can record the full fluorescent spectrum of every stochastic single-molecule emission event. This capability allows us to quantify the spatial and spectral characteristics of fluorescent impurities introduced by sample preparation steps, based on which we developed a method to effectively separate fluorescent impurities from target molecules.

Indexed as

ArtifactsBacteriophage lambdaDNA, ViralFluorescent DyesMicroscopy, FluorescenceSingle Molecule ImagingDNA, ViralFluorescent Dyesfluorescence spectral imagingfluorescent impuritiessingle-molecule localization microscopysingle-molecule spectroscopy

Identifiers

PMID30334394
PMCPMC6210800

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.