Evidence map›Paper›PMID 30333810›Full record

ArticleFrontiers in microbiology2018

Changes in the Fungal Microbiome of Maize During Hermetic Storage in the United States and Kenya.

Brett Lane, Sandeep Sharma, Chenxing Niu, Angeline W Maina, John M Wagacha, Burton H Bluhm, Charles P Woloshuk

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The seed microbiomes of staple food crops.Microbial biotechnology · 2023
    Review
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Brett LaneDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN, United States.
Sandeep SharmaDepartment of Plant Pathology, University of Arkansas, Fayetteville, AR, United States.
Chenxing NiuDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN, United States.
Angeline W MainaSchool of Biological Sciences, University of Nairobi, Nairobi, Kenya.
John M WagachaSchool of Biological Sciences, University of Nairobi, Nairobi, Kenya.
Burton H BluhmDepartment of Plant Pathology, University of Arkansas, Fayetteville, AR, United States.
Charles P WoloshukDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN, United States.
Purdue University West Lafayette · USUniversity of Arkansas at Fayetteville · USUniversity of Nairobi · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prior to harvest, maize kernels are invaded by a diverse population of fungal organisms that comprise the microbiome of the grain mass. Poor post-harvest practices and improper drying can lead to the growth of mycotoxigenic storage fungi and deterioration of grain quality. Hermetic storage bags are a low-cost technology for the preservation of grain during storage, which has seen significant adoption in many regions of Sub-Saharan Africa. This study explored the use of high-throughput DNA sequencing of the fungal Internal Transcribed Spacer 2 (ITS2) region for characterization of the fungal microbiome before and after 3 months of storage in hermetic and non-hermetic (woven) bags in the United States and Kenya. Analysis of 1,377,221 and 3,633,944 ITS2 sequences from the United States and Kenya, respectively, resulted in 251 and 164 operational taxonomic units (OTUs). Taxonomic assignment of these OTUs revealed 63 and 34 fungal genera in the US and Kenya samples, respectively, many of which were not detected by traditional plating methods. The most abundant genus was

Indexed as

aflatoxinsfood securitymetagenomic analysisPICSpost-harvest

Identifiers

PMID30333810
PMCPMC6176044
OpenAlexW2894941214

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.