Evidence map›Paper›PMID 30333148›Full record

ArticleThe Plant cell2018

Resurrected Protein Interaction Networks Reveal the Innovation Potential of Ancient Whole-Genome Duplication.

Zhicheng Zhang, Heleen Coenen, Philip Ruelens, Rashmi R Hazarika, Tareq Al Hindi, Georgianna K Oguis, Anja Vandeperre, Vera van Noort, Koen Geuten

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Applications of ancestral sequence reconstruction for understanding the evolution of plant specialized metabolism.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  2. Article
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  7. International journal of molecular sciences · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zhicheng ZhangDepartment of Biology, KU Leuven, B-3001 Leuven, Belgium.ORCID 0000-0001-6973-2988
Heleen CoenenDepartment of Biology, KU Leuven, B-3001 Leuven, Belgium.ORCID 0000-0003-4209-4247
Philip RuelensDepartment of Biology, KU Leuven, B-3001 Leuven, Belgium.ORCID 0000-0003-1524-1897
Rashmi R HazarikaDepartment of Microbial and Molecular Systems, KU Leuven, B-3001 Leuven, Belgium.ORCID 0000-0002-5843-0535
Tareq Al HindiDepartment of Biology, KU Leuven, B-3001 Leuven, Belgium.ORCID 0000-0003-1350-9490
Georgianna K OguisDepartment of Biology, KU Leuven, B-3001 Leuven, Belgium.ORCID 0000-0003-4525-1260
Anja VandeperreDepartment of Biology, KU Leuven, B-3001 Leuven, Belgium.ORCID 0000-0002-9580-2553
Vera van NoortDepartment of Microbial and Molecular Systems, KU Leuven, B-3001 Leuven, Belgium.ORCID 0000-0002-8436-6602
Koen GeutenDepartment of Biology, KU Leuven, B-3001 Leuven, Belgium koen.geuten@kuleuven.be.ORCID 0000-0002-9692-4499
KU Leuven · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolution of plants is characterized by whole-genome duplications, sometimes closely associated with the origin of large groups of species. The gamma (γ) genome triplication occurred at the origin of the core eudicots, which comprise ∼75% of flowering plants. To better understand the impact of whole-genome duplication, we studied the protein interaction network of MADS domain transcription factors, which are key regulators of reproductive development. We reconstructed, synthesized, and tested the interactions of ancestral proteins immediately before and closely after the triplication and directly compared these ancestral networks to the extant networks of

Indexed as

ArabidopsisGene DuplicationGenome, PlantPlant ProteinsProtein Interaction MapsSolanum lycopersicumTranscription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID30333148
PMCPMC6305981
OpenAlexW2531551927

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.