Evidence map›Paper›PMID 30332987›Full record

ArticleBMC microbiology2018

Temperature-controlled thermophilic bacterial communities in hot springs of western Sichuan, China.

Jie Tang, Yuanmei Liang, Dong Jiang, Liheng Li, Yifan Luo, Md Mahfuzur R Shah, Maurycy Daroch

Abstract read
In one paragraph

Article in BMC microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Metagenomics insight into Puga geothermal geyser located in Himalayan Geothermal Belt (Trans-Himalayan Plateau) Ladakh, India.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  3. Deciphering the microbial communities of alkaline hot spring in Panamik, Ladakh, India using a high-throughput sequencing approach.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
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  14. Polyphasic Identification and Genomic Insights ofFrontiers in microbiology · 2022
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors.

Jie TangSchool of Pharmacy and Bioengineering, Chengdu University, Chengdu, 610106, China.
Yuanmei LiangSchool of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
Dong JiangSchool of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
Liheng LiSchool of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
Yifan LuoSchool of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
Md Mahfuzur R ShahSchool of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
Maurycy DarochSchool of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China. m.daroch@pkusz.edu.cn.ORCID 0000-0002-8183-8854

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGanzi Prefecture in Western China is situated geographically at the transition regions between Tibetan Plateau and Sichuan Basin in a highly tectonically active boundary area between the India and Eurasia plates. The region hosts various hot springs that span a wide range of temperature from 30 to 98 °C and are located at high altitude (up to 4200 m above sea level) in the region of large geothermal anomalies and active Xianshuihe slip-fault that has been active since Holocene. The site represents a biodiversity reservoir for thermophiles, yet their diversity and relationship to geochemical parameters are largely unknown. In the present work, bacterial diversity and community structure in 14 hot springs of Ganzi were investigated using Illumina MiSeq sequencing.

resultsBacterial community compositions were evidently distinct among the 14 hot springs, and the bacterial communities in hot springs were majorly abundant in phyla Aquificae, Cyanobacteria and Proteobacteria. Both clustering and PCoA analysis suggested the existence of four bacterial community patterns in these hot springs. Temperature contributed to shaping bacterial community structure of hot springs as revealed by correlation analysis. Abundant unassigned-genus sequences detected in this study strongly implied the presence of novel genera or genetic resources in these hot springs.

conclusionThe diversity of hot springs of Ganzi prefecture in Western Sichuan, China is evidently shaped by temperature. Interestingly disproportionally abundant unassigned-genus sequences detected in this study show indicate potential of novel genera or phylotypes. We hypothesize that frequent earthquakes and rapidly changing environment might have contributed to evolution of these potentially new lineages. Overall, this study provided first insight into the bacterial diversity of hot springs located in Western Sichuan, China and its comparison with other similar communities worldwide.

Indexed as

Genetic VariationHot TemperatureMicrobial ConsortiaWater MicrobiologyArchaeaBacteriaChinaHigh-Throughput Nucleotide SequencingHot SpringsPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNARNA, Ribosomal, 16S16S rRNABiodiversityGanziHot springsMiSeq platformThermophile

Identifiers

PMID30332987
PMCPMC6191902

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.