Evidence map›Paper›PMID 30332632›Full record

ArticleImmunity2018

The Lineage-Defining Transcription Factors SOX2 and NKX2-1 Determine Lung Cancer Cell Fate and Shape the Tumor Immune Microenvironment.

Gurkan Mollaoglu, Alex Jones, Sarah J Wait, Anandaroop Mukhopadhyay, Sangmin Jeong, Rahul Arya, Soledad A Camolotto, Timothy L Mosbruger, Chris J Stubben, Christopher J Conley and 11 more

Abstract read
In one paragraph

Article in Immunity, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 156 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
156citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

156 citing papers in PubMed, 1 synthesis or guideline pooled it.

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96 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors.

Gurkan MollaogluDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Alex JonesDepartment of Pathology, University of Utah, Salt Lake City, UT 84112, USA.
Sarah J WaitDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Anandaroop MukhopadhyayDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Sangmin JeongDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Rahul AryaDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Soledad A CamolottoDepartment of Pathology, University of Utah, Salt Lake City, UT 84112, USA.
Timothy L MosbrugerHuntsman Cancer Institute, Bioinformatics Shared Resource, Salt Lake City, UT 84112, USA.
Chris J StubbenHuntsman Cancer Institute, Bioinformatics Shared Resource, Salt Lake City, UT 84112, USA.
Christopher J ConleyHuntsman Cancer Institute, Bioinformatics Shared Resource, Salt Lake City, UT 84112, USA.
Arjun BhutkarDavid H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Jeffery M VahrenkampDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Kristofer C BerrettDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Melissa H CessnaIntermountain Biorepository, Intermountain Healthcare, Salt Lake City, UT 84111, USA.
Thomas E LaneDepartment of Pathology, University of Utah, Salt Lake City, UT 84112, USA.
Benjamin L WittDepartment of Pathology, University of Utah, Salt Lake City, UT 84112, USA; ARUP Laboratories at University of Utah, Salt Lake City, UT 84108, USA.
Mohamed E SalamaDepartment of Pathology, University of Utah, Salt Lake City, UT 84112, USA; ARUP Laboratories at University of Utah, Salt Lake City, UT 84108, USA.
Jason GertzDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Kevin B JonesDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA; Department of Orthopaedics, University of Utah, Salt Lake City, UT 84112, USA.
Eric L SnyderDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA; Department of Pathology, University of Utah, Salt Lake City, UT 84112, USA.
Trudy G OliverDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA. Electronic address: trudy.oliver@hci.utah.edu.

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI KATHARINE S ULLMAN · 1986 to 2026
$72.6M
Transcriptional Regulation of Lung Cancer IdentityR01CA212415 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Eric Lee Snyder · 2017 to 2026
$3.2M
Identifying Mechanisms of Sox2-Driven Squamous Cell Lung CancerR01CA187457 · NCI · UNIVERSITY OF UTAH · PI OLIVER, TRUDY GALE · 2014 to 2018
$1.5M
Identifying Genetic Drivers of the Immunosuppressive Tumor Microenvironment in Lung CancerF99CA223015 · NCI · UNIVERSITY OF UTAH · PI MOLLAOGLU, GURKAN · 2017 to 2018
$65k
NCI NIH HHS F99 CA223015NCI NIH HHS P30 CA042014NCI NIH HHS R01 CA187457NCI NIH HHS R01 CA212415
6 · The paper itself

Abstract

The major types of non-small-cell lung cancer (NSCLC)-squamous cell carcinoma and adenocarcinoma-have distinct immune microenvironments. We developed a genetic model of squamous NSCLC on the basis of overexpression of the transcription factor Sox2, which specifies lung basal cell fate, and loss of the tumor suppressor Lkb1 (SL mice). SL tumors recapitulated gene-expression and immune-infiltrate features of human squamous NSCLC; such features included enrichment of tumor-associated neutrophils (TANs) and decreased expression of NKX2-1, a transcriptional regulator that specifies alveolar cell fate. In Kras-driven adenocarcinomas, mis-expression of Sox2 or loss of Nkx2-1 led to TAN recruitment. TAN recruitment involved SOX2-mediated production of the chemokine CXCL5. Deletion of Nkx2-1 in SL mice (SNL) revealed that NKX2-1 suppresses SOX2-driven squamous tumorigenesis by repressing adeno-to-squamous transdifferentiation. Depletion of TANs in SNL mice reduced squamous tumors, suggesting that TANs foster squamous cell fate. Thus, lineage-defining transcription factors determine the tumor immune microenvironment, which in turn might impact the nature of the tumor.

Indexed as

AnimalsCarcinoma, Non-Small-Cell LungCell DifferentiationCell LineageCell Line, TumorCells, CulturedDisease Models, AnimalFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHEK293 CellsHumansLung NeoplasmsMice, Inbred C57BLMice, KnockoutMice, TransgenicNkx2-1 protein, mouseSOXB1 Transcription FactorsThyroid Nuclear Factor 1adenocarcinomaCXCL5lung cancermouse modelsNKX2-1SOX2squamoustransdifferentiationtumor-associated neutrophilstumor immune microenvironment

Identifiers

PMID30332632
PMCPMC6197489

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.