Evidence map›Paper›PMID 30327589›Full record

ArticleFrontiers in molecular neuroscience2018

Cell-Specific Transcriptome Analysis Shows That Adult Pillar and Deiters' Cells Express Genes Encoding Machinery for Specializations of Cochlear Hair Cells.

Huizhan Liu, Lei Chen, Kimberlee P Giffen, Sean T Stringham, Yi Li, Paul D Judge, Kirk W Beisel, David Z Z He

Open access · goldAbstract read
In one paragraph

Article in Frontiers in molecular neuroscience, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 3 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 3 syntheses or guidelines pooled it, 99 citations in OpenAlex.

  1. Pooled it
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  15. Hearing Loss and Audiogenic Seizures Induced by Hypofunctional Prestin Variants.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  16. SHANK2 establishes auditory hair bundle architecture essential for mammalian hearing.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Cochlear Implantation Outcomes in Genotyped Subjects with Sensorineural Hearing Loss.Journal of the Association for Research in Otolaryngology : JARO · 2025
    Article
  18. Article
  19. Lateral olivocochlear neurons modulate cochlear responses to noise exposure.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  20. MYO7A is required for the functional integrity of the mechanoelectrical transduction complex in hair cells of the adult cochlea.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Huizhan LiuDepartment of Biomedical Sciences, Creighton University School of Medicine, Omaha, NE, United States.
Lei ChenDepartment of Biomedical Sciences, Creighton University School of Medicine, Omaha, NE, United States.
Kimberlee P GiffenDepartment of Biomedical Sciences, Creighton University School of Medicine, Omaha, NE, United States.
Sean T StringhamDepartment of Biomedical Sciences, Creighton University School of Medicine, Omaha, NE, United States.
Yi LiDepartment of Otorhinolaryngology-Head and Neck Surgery, Beijing Tonren Hospital, Capital Medical University, Beijing, China.
Paul D JudgeDepartment of Otolaryngology-Head and Neck Surgery, University of Nebraska Medical Center, Omaha, NE, United States.
Kirk W BeiselDepartment of Biomedical Sciences, Creighton University School of Medicine, Omaha, NE, United States.
David Z Z HeDepartment of Biomedical Sciences, Creighton University School of Medicine, Omaha, NE, United States.
Creighton University · USBeijing Tongren Hospital · CNUniversity of Nebraska Medical Center · US

Funding

UNMC Structural Biology CoreP20GM103427 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Heather Colleen Jensen-Smith · 2012 to 2026
$59.2M
ZINC FINGER-INSPIRED FLUORESCENT CHEMOSENSORSP20RR016469 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI TURPEN, JAMES B · 2001 to 2011
$36.2M
TRANSGENIC EXPRESSION ANALYSIS OF MIRNA-144P20RR018788 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI NYSTUEN, ARNE M · 2003 to 2011
$16.5M
UNMC Histology/Imaging and Creighton University Imaging Core FacilityP30GM110768 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SMITH, SHELLEY D · 2014 to 2018
$5.1M
BIOPHYSICS AND DEVELOPMENT OF COCHLEAR OUTER HAIR CELLSR01DC004696 · NIDCD · FATHER FLANAGAN'S BOYS'HOME · PI HE, ZHI-ZHOU · 2001 to 2016
$4.2M
Mechanisms of Biological Aging of Cochlear Hair CellsR01DC016807 · NIDCD · CREIGHTON UNIVERSITY · PI HE, ZHI-ZHOU · 2018 to 2022
$1.9M
UNMC SIG Supporting Next-generation DNA Sequencing TechnologyS10RR027754 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI EUDY, JAMES · 2010 to 2010
$500k
NCRR NIH HHS P20 RR016469NCRR NIH HHS P20 RR018788NCRR NIH HHS S10 RR027754NIDCD NIH HHS R01 DC016807NIGMS NIH HHS P20 GM103427NIGMS NIH HHS P30 GM110768
6 · The paper itself

Abstract

The mammalian auditory sensory epithelium, the organ of Corti, is composed of hair cells and supporting cells. Hair cells contain specializations in the apical, basolateral and synaptic membranes. These specializations mediate mechanotransduction, electrical and mechanical activities and synaptic transmission. Supporting cells maintain homeostasis of the ionic and chemical environment of the cochlea and contribute to the stiffness of the cochlear partition. While spontaneous proliferation and transdifferentiation of supporting cells are the source of the regenerative response to replace lost hair cells in lower vertebrates, supporting cells in adult mammals no longer retain that capability. An important first step to revealing the basic biological properties of supporting cells is to characterize their cell-type specific transcriptomes. Using RNA-seq, we examined the transcriptomes of 1,000 pillar and 1,000 Deiters' cells, as well as the two types of hair cells, individually collected from adult CBA/J mouse cochleae using a suction pipette technique. Our goal was to determine whether pillar and Deiters' cells, the commonly targeted cells for hair cell replacement, express the genes known for encoding machinery for hair cell specializations in the apical, basolateral, and synaptic membranes. We showed that both pillar and Deiters' cells express these genes, with pillar cells being more similar to hair cells than Deiters' cells. The fact that adult pillar and Deiters' cells express the genes cognate to hair cell specializations provides a strong molecular basis for targeting these cells for mammalian hair cell replacement after hair cells are lost due to damage.

Indexed as

deiters' cellhair cellmousepillar cellRNA-seqtranscriptome

Identifiers

PMID30327589
PMCPMC6174830
OpenAlexW2895044356

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.