Evidence map›Paper›PMID 30327559›Full record

ArticleNature chemical biology2018

Enzyme promiscuity drives branched-chain fatty acid synthesis in adipose tissues.

Martina Wallace, Courtney R Green, Lindsay S Roberts, Yujung Michelle Lee, Justin L McCarville, Joan Sanchez-Gurmaches, Noah Meurs, Jivani M Gengatharan, Justin D Hover, Susan A Phillips and 7 more

Abstract read
In one paragraph

Article in Nature chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed, 1 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 1 synthesis or guideline pooled it, 216 citations in OpenAlex.

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51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Martina WallaceDepartment of Bioengineering, University of California, San Diego, La Jolla, CA, USA.
Courtney R GreenDepartment of Bioengineering, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-9279-0649
Lindsay S RobertsDepartments of Chemistry, Molecular and Cell Biology, and Nutritional Science and Toxicology, University of California, Berkeley, Berkeley, CA, USA.
Yujung Michelle LeeNomis Center for Immunobiology and Microbial Pathogenesis, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Justin L McCarvilleNomis Center for Immunobiology and Microbial Pathogenesis, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Joan Sanchez-GurmachesDivision of Endocrinology, Division of Developmental Biology, Cincinnati Children's Hospital Research Foundation, Cincinnati, OH, USA.
Noah MeursDepartment of Bioengineering, University of California, San Diego, La Jolla, CA, USA.
Jivani M GengatharanDepartment of Bioengineering, University of California, San Diego, La Jolla, CA, USA.
Justin D HoverDepartment of Bioengineering, University of California, San Diego, La Jolla, CA, USA.
Susan A PhillipsDivision of Pediatric Endocrinology, Department of Pediatrics, University of California at San Diego, La Jolla, CA, USA.
Theodore P CiaraldiVirginia San Diego Healthcare System, San Diego, CA, USA.
David A GuertinProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA, USA.
Pedro CabralesDepartment of Bioengineering, University of California, San Diego, La Jolla, CA, USA.
Janelle S AyresNomis Center for Immunobiology and Microbial Pathogenesis, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Daniel K NomuraDepartments of Chemistry, Molecular and Cell Biology, and Nutritional Science and Toxicology, University of California, Berkeley, Berkeley, CA, USA.
Rohit LoombaNAFLD Research Center, Division of Gastroenterology, Department of Medicine, University of California at San Diego, La Jolla, CA, USA.
Christian M MetalloDepartment of Bioengineering, University of California, San Diego, La Jolla, CA, USA. cmetallo@ucsd.edu.
University of California San Diego · USSalk Institute for Biological Studies · USUniversity of California, Berkeley · USCincinnati Children's Hospital Medical Center · USUniversity of Massachusetts Chan Medical School · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
Recombinant HbAp Production for In Vivo Toxicity StudiesP01HL110900 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI FRIEDMAN, JOEL M · 2012 to 2016
$10.6M
Tolerance defenses in host-microbiota interactionsR01AI114929 · NIAID · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI AYRES, JANELLE S · 2015 to 2025
$4.9M
Attenuating the Oxidative and Myocardial Side-Effects of Acellular HemoglobinR01HL126945 · NHLBI · OHIO STATE UNIVERSITY · PI CABRALES, PEDRO, PALMER, ANDRE FRANCIS · 2016 to 2019
$1.7M
Annotating the Role of Dysregulated Inositol Phosphate Metabolism in Malignant CaR01CA172667 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI NOMURA, DANIEL · 2013 to 2017
$1.7M
Exploiting Metabloic Defects in Tumors with Mutant IDH1 and IDH2R01CA188652 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI METALLO, CHRISTIAN MICHAEL · 2014 to 2018
$1.6M
NCI NIH HHS P30 CA014195NCI NIH HHS R01 CA172667NCI NIH HHS R01 CA188652NHLBI NIH HHS P01 HL110900NHLBI NIH HHS R01 HL126945NIAID NIH HHS R01 AI114929
6 · The paper itself

Abstract

Fatty acid synthase (FASN) predominantly generates straight-chain fatty acids using acetyl-CoA as the initiating substrate. However, monomethyl branched-chain fatty acids (mmBCFAs) are also present in mammals but are thought to be primarily diet derived. Here we demonstrate that mmBCFAs are de novo synthesized via mitochondrial BCAA catabolism, exported to the cytosol by adipose-specific expression of carnitine acetyltransferase (CrAT), and elongated by FASN. Brown fat exhibits the highest BCAA catabolic and mmBCFA synthesis fluxes, whereas these lipids are largely absent from liver and brain. mmBCFA synthesis is also sustained in the absence of microbiota. We identify hypoxia as a potent suppressor of BCAA catabolism that decreases mmBCFA synthesis in obese adipose tissue, such that mmBCFAs are significantly decreased in obese animals. These results identify adipose tissue mmBCFA synthesis as a novel link between BCAA metabolism and lipogenesis, highlighting roles for CrAT and FASN promiscuity influencing acyl-chain diversity in the lipidome.

Indexed as

3T3 CellsAdipocytesAdipose TissueAmino Acids, Branched-ChainAnimalsCarnitine O-AcetyltransferaseCRISPR-Cas SystemsCytosolFatty AcidsFatty Acid SynthasesFemaleHypoxiaLentivirusLipogenesisMiceMice, Inbred C57BLAmino Acids, Branched-ChainCarnitine O-AcetyltransferaseFatty AcidsFatty Acid SynthasesRNA, Small Interfering

Identifiers

PMID30327559
PMCPMC6245668
OpenAlexW2895794785

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.