Evidence map›Paper›PMID 30327349›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Molecular profiling of nonalcoholic fatty liver disease-associated hepatocellular carcinoma using SB transposon mutagenesis.

Takahiro Kodama, Jing Yi, Justin Y Newberg, Jean C Tien, Hao Wu, Milton J Finegold, Michiko Kodama, Zhubo Wei, Takeshi Tamura, Tetsuo Takehara and 3 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. A Mouse in vivo Model Mimicking MASH-Related HCC Pathogenesis.Journal of hepatocellular carcinoma · 2026
    Article
  3. Molecular mechanisms in MASLD/MASH-related HCC.Hepatology (Baltimore, Md.) · 2025
    Review
  4. Article
  5. Small-molecule-based targeted therapy in liver cancer.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Exploring liver cancer biology through functional genetic screens.Nature reviews. Gastroenterology & hepatology · 2021
    Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Takahiro KodamaDepartment of Gastroenterology and Hepatology, Graduate School of Medicine, Osaka University, Suita, Osaka 5650871, Japan; t-kodama@gh.med.osaka-u.ac.jp ncopeland1@mdanderson.org.ORCID 0000-0002-6250-1324
Jing YiDepartment of Cancer Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Justin Y NewbergDepartment of Molecular Oncology, Moffitt Cancer Center, Tampa, FL 33612.
Jean C TienMichigan Center for Translational Pathology, Department of Pathology, University of Michigan, Ann Arbor, MI 48109.
Hao WuDepartment of Pathology, Texas Children's Hospital and Baylor College of Medicine, Houston, TX 77030.
Milton J FinegoldDepartment of Pathology, Texas Children's Hospital and Baylor College of Medicine, Houston, TX 77030.
Michiko KodamaDepartment of Obstetrics and Gynecology, Graduate School of Medicine, Osaka University, Osaka 5650871, Japan.
Zhubo WeiCancer Research Program, Houston Methodist Research Institute, Houston, TX 77030.
Takeshi TamuraDepartment of Gastroenterology and Hepatology, Graduate School of Medicine, Osaka University, Suita, Osaka 5650871, Japan.
Tetsuo TakeharaDepartment of Gastroenterology and Hepatology, Graduate School of Medicine, Osaka University, Suita, Osaka 5650871, Japan.
Randy L JohnsonDepartment of Cancer Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Nancy A JenkinsGenetics Department, The University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Neal G CopelandGenetics Department, The University of Texas MD Anderson Cancer Center, Houston, TX 77030 t-kodama@gh.med.osaka-u.ac.jp ncopeland1@mdanderson.org.
The University of Osaka · JPThe University of Texas MD Anderson Cancer Center · USBaylor College of Medicine · USHouston Methodist · USMoffitt Cancer Center · USUniversity of Michigan · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nonalcoholic fatty liver disease (NAFLD) is the fastest rising cause of hepatocellular carcinoma (HCC) in Western countries; however, the molecular mechanisms that cause NAFLD-HCC remain elusive. To identify molecular drivers of NAFLD-HCC, we performed Sleeping Beauty (SB) transposon mutagenesis screens in liver-specific Pten knockout and in high-fat diet-fed mice, which are murine models of NAFLD-HCC. SB mutagenesis accelerated liver tumor formation in both models and identified 588 and 376 candidate cancer genes (CCGs), respectively; 257 CCGs were common to both screens and were enriched in signaling pathways known to be important for human HCC. Comparison of these CCGs with those identified in a previous SB screen of hepatitis B virus-induced HCC identified a core set of 141 CCGs that were mutated in all screens. Forty-one CCGs appeared specific for NAFLD-HCC, including Sav1, a component of the Hippo signaling pathway and the most frequently mutated gene identified in both NAFLD-HCC screens. Liver-specific deletion of Sav1 was found to promote hepatic lipid accumulation, apoptosis, and fibrogenesis, leading to the acceleration of hepatocarcinogenesis in liver-specific Pten mutant mice. Sav1/Pten double-mutant livers also showed a striking up-regulation of markers of liver progenitor cells (LPCs), along with synergistic activation of Yap, which is a major downstream effector of Hippo signaling. Lastly, Yap activation, in combination with Pten inactivation, was found to accelerate cell growth and sphere formation of LPCs in vitro and induce their malignant transformation in allografts. Our forward genetic screens in mice have thus identified pathways and genes driving the development of NAFLD-HCC.

Indexed as

AnimalsApoptosisCarcinogenesisCarcinoma, HepatocellularCell Transformation, NeoplasticDiet, High-FatDNA Transposable ElementsLiverLiver NeoplasmsMiceMutagenesisNon-alcoholic Fatty Liver DiseaseOncogenesSignal TransductionUp-RegulationDNA Transposable ElementsHippoliver cancerNAFLDSav1Sleeping Beauty

Identifiers

PMID30327349
PMCPMC6217425
OpenAlexW2897617954

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.