Evidence map›Paper›PMID 30326916›Full record

ArticleMicrobial cell factories2018

Metabolic flux analysis in Ashbya gossypii using

Susanne Katharina Schwechheimer, Judith Becker, Lindsay Peyriga, Jean-Charles Portais, Christoph Wittmann

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Metabolic engineering communications · 2025
    Article
  5. Kinetics of Riboflavin Production byInternational journal of molecular sciences · 2024
    Article
  6. RP-HPLC Separation andBiomolecules · 2023
    Article
  7. Article
  8. Article
  9. Genome Sequence and Analysis of the Flavinogenic YeastJournal of fungi (Basel, Switzerland) · 2022
    Article
  10. Frontiers in molecular neuroscience · 2022
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Production of Vitamin B2 (Riboflavin) by Microorganisms: An Overview.Frontiers in bioengineering and biotechnology · 2020
    Review
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Susanne Katharina SchwechheimerInstitute of Systems Biotechnology, Saarland University, Campus A1.5, 66123, Saarbrücken, Germany.
Judith BeckerInstitute of Systems Biotechnology, Saarland University, Campus A1.5, 66123, Saarbrücken, Germany.
Lindsay PeyrigaUniversité de Toulouse, INSA, UPS, INP, Toulouse, France.
Jean-Charles PortaisUniversité de Toulouse, INSA, UPS, INP, Toulouse, France.
Christoph WittmannInstitute of Systems Biotechnology, Saarland University, Campus A1.5, 66123, Saarbrücken, Germany. christoph.wittmann@uni-saarland.de.ORCID http://orcid.org/0000-0002-7952-985X
Saarland University · DECentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe fungus Ashbya gossypii is an important industrial producer of the vitamin riboflavin. Using this microbe, riboflavin is manufactured in a two-stage process based on a rich medium with vegetable oil, yeast extract and different precursors: an initial growth and a subsequent riboflavin production phase. So far, our knowledge on the intracellular metabolic fluxes of the fungus in this complex process is limited, but appears highly relevant to better understand and rationally engineer the underlying metabolism. To quantify intracellular fluxes of growing and riboflavin producing A. gossypii, studies with different

resultsDuring growth, the TCA cycle was found highly active, whereas the cells exhibited a low flux through gluconeogenesis as well as pentose phosphate pathway. Yeast extract was the main carbon donor for anabolism,  while vegetable oil selectively contributed to the proteinogenic amino acids glutamate, aspartate, and alanine. During the subsequent riboflavin biosynthetic phase, the carbon flux through the TCA cycle remained high. Regarding riboflavin formation, most of the vitamin's carbon originated from rapeseed oil (81 ± 1%), however extracellular glycine and yeast extract also contributed with 9 ± 0% and 8 ± 0%, respectively. In addition, advanced yeast extract-based building blocks such as guanine and GTP were directly incorporated into the vitamin.

conclusionIntracellular carbon fluxes for growth and riboflavin production on vegetable oil provide the first flux insight into a  fungus on complex industrial medium. The knowledge gained therefrom is valuable for further strain and process improvement. Yeast extract, while being the main carbon source during growth, contributes valuable building blocks to the synthesis of vitamin B

Indexed as

Metabolic Flux AnalysisAscomycotaNutrientsRiboflavinNutrientsRiboflavin13C tracerAshbya gossypiiIndustrial processMetabolic fluxRiboflavinVitamin B2Yeast extract

Identifiers

PMID30326916
PMCPMC6190667
OpenAlexW2898008780

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.