Evidence map›Paper›PMID 30326149›Full record

ArticleJournal of neurochemistry2018

Distribution and development of molecularly distinct perineuronal nets in visual thalamus.

Ubadah Sabbagh, Aboozar Monavarfeshani, Kaiwen Su, Masoud Zabet-Moghadam, James Cole, Eric Carnival, Jianmin Su, Mehdi Mirzaei, Vivek Gupta, Ghasem Hosseini Salekdeh and 1 more

Abstract read
In one paragraph

Article in Journal of neurochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
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  15. Visual Information Processing in the Ventral Division of the Mouse Lateral Geniculate Nucleus of the Thalamus.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  16. Retinal inputs signal astrocytes to recruit interneurons into visual thalamus.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ubadah SabbaghDevelopmental and Translational Neurobiology Center, Virginia Tech Carilion Research Institute, Roanoke, Virginia, USA.ORCID 0000-0002-5324-0265
Aboozar MonavarfeshaniDevelopmental and Translational Neurobiology Center, Virginia Tech Carilion Research Institute, Roanoke, Virginia, USA.
Kaiwen SuDevelopmental and Translational Neurobiology Center, Virginia Tech Carilion Research Institute, Roanoke, Virginia, USA.
Masoud Zabet-MoghadamCenter for Biotechnology and Genomics, Texas Tech University, Lubbock, Virginia, USA.
James ColeDevelopmental and Translational Neurobiology Center, Virginia Tech Carilion Research Institute, Roanoke, Virginia, USA.
Eric CarnivalDevelopmental and Translational Neurobiology Center, Virginia Tech Carilion Research Institute, Roanoke, Virginia, USA.
Jianmin SuDevelopmental and Translational Neurobiology Center, Virginia Tech Carilion Research Institute, Roanoke, Virginia, USA.
Mehdi MirzaeiDepartment of Molecular Sciences, Macquarie University, North Ryde, New South Wales, Australia.
Vivek GuptaDepartment of Clinical Medicine, Macquarie University, Sydney, New South Wales, Australia.
Ghasem Hosseini SalekdehDepartment of Molecular Sciences, Macquarie University, North Ryde, New South Wales, Australia.
Michael A FoxDevelopmental and Translational Neurobiology Center, Virginia Tech Carilion Research Institute, Roanoke, Virginia, USA.ORCID 0000-0002-1649-7782

Funding

Regulation of nuclei-specific retinogeniculate targetingR01EY021222 · NEI · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI FOX, MICHAEL A · 2011 to 2021
$3.8M
Investigating the Mechanism of Optic Nerve Hypoplasia Associated with CASK MutationR01EY024712 · NEI · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI MUKHERJEE, KONARK · 2015 to 2019
$2.0M
Virginia Tech Carilion Research Institute Translational Neurobiology Summer Undergraduate Research Fellowship (VTCRI neuroSURF)R25NS105141 · NINDS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI FOX, MICHAEL A · 2018 to 2022
$540k
NEI NIH HHS R01 EY021222NEI NIH HHS R01 EY024712NIH HHS EY021222NIH HHS EY024712NINDS NIH HHS R25 NS105141
6 · The paper itself

Abstract

Visual information is detected by the retina and transmitted into the brain by retinal ganglion cells. In rodents, the visual thalamus is a major recipient of retinal ganglion cells axons and is divided into three functionally distinct nuclei: the dorsal lateral geniculate nucleus (dLGN), ventral LGN (vLGN), and intergeniculate leaflet. Despite being densely innervated by retinal input, each nucleus in rodent visual thalamus possesses diverse molecular profiles which underpin their unique circuitry and cytoarchitecture. Here, we combined large-scale unbiased proteomic and transcriptomic analyses to elucidate the molecular expression profiles of the developing mouse dLGN and vLGN. We identified several extracellular matrix proteins as differentially expressed in these regions, particularly constituent molecules of perineuronal nets (PNNs). Remarkably, we discovered at least two types of molecularly distinct Aggrecan-rich PNN populations in vLGN, exhibiting non-overlapping spatial, temporal, and cell-type specific expression patterns. The mechanisms responsible for the formation of these two populations of PNNs also differ as the formation of Cat315

Indexed as

AnimalsExtracellular MatrixExtracellular Matrix ProteinsGeniculate BodiesImmunohistochemistryMiceMice, Inbred C57BLNerve NetProteomicsReal-Time Polymerase Chain ReactionRetinaRetinal Ganglion CellsThalamusVision, OcularVisual PerceptionExtracellular Matrix ProteinsaggrecanLGNperineuronal netretinogeniculatethalamusvisual

Identifiers

PMID30326149
PMCPMC6532419

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.