Evidence map›Paper›PMID 30326066›Full record

ArticleInvestigative ophthalmology & visual science2018

The Carnitine Shuttle Pathway is Altered in Patients With Neovascular Age-Related Macular Degeneration.

Sabrina L Mitchell, Karan Uppal, Samantha M Williamson, Ken Liu, L Goodwin Burgess, ViLinh Tran, Allison C Umfress, Kelli L Jarrell, Jessica N Cooke Bailey, Anita Agarwal and 5 more

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 2 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 2 syntheses or guidelines pooled it, 52 citations in OpenAlex.

  1. Pooled it
  2. Metabolomics in Age-Related Macular Degeneration: A Systematic Review.Investigative ophthalmology & visual science · 2020
    Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 1 country.

Sabrina L MitchellVanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Karan UppalDepartment of Medicine, Emory University Medical Center, Atlanta, Georgia, United States.
Samantha M WilliamsonVanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Ken LiuDepartment of Medicine, Emory University Medical Center, Atlanta, Georgia, United States.
L Goodwin BurgessVanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
ViLinh TranDepartment of Medicine, Emory University Medical Center, Atlanta, Georgia, United States.
Allison C UmfressVanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Kelli L JarrellVanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Jessica N Cooke BaileyDepartment of Population and Quantitative Health Sciences, Institute for Computational Biology, Case Western Reserve University, Cleveland, Ohio, United States.
Anita AgarwalVanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Margaret Pericak-VanceJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, Florida, United States.
Jonathan L HainesDepartment of Population and Quantitative Health Sciences, Institute for Computational Biology, Case Western Reserve University, Cleveland, Ohio, United States.
William K ScottJohn P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, Florida, United States.
Dean P JonesDepartment of Medicine, Emory University Medical Center, Atlanta, Georgia, United States.
Milam A BrantleyVanderbilt Eye Institute, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Vanderbilt University Medical Center · USUniversity Medical Center · USCase Western Reserve University · USDr. John T. Macdonald Foundation · USEmory University · USUniversity of Miami · US

Funding

Unifying Genetics Epidemiology of Macular DegenerationR01EY012118 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI AGARWAL, ANITA, HAINES, JONATHAN L · 2006 to 2015
$12.2M
Clinical and Translational Science Collaborative of ClevelandKL2TR000440 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$11.1M
Graduate Training in the Pharmacological StudiesT32GM008602 · NIGMS · EMORY UNIVERSITY · PI HALL, RANDY A. · 1996 to 2021
$5.1M
Metabolomic and Genetic Interactions in Age-Related Macular DegenerationR01EY022618 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BRANTLEY, MILAM A · 2013 to 2017
$2.3M
Orbitrap Elite/H-ESI BundleS10OD018006 · OD · EMORY UNIVERSITY · PI JONES, DEAN PAUL · 2014 to 2014
$600k
NCATS NIH HHS KL2 TR000440NEI NIH HHS R01 EY012118NEI NIH HHS R01 EY022618NIGMS NIH HHS T32 GM008602NIH HHS S10 OD018006
6 · The paper itself

Abstract

Purpose: To identify metabolites and metabolic pathways altered in neovascular age-related macular degeneration (NVAMD). Methods: We performed metabolomics analysis using high-resolution C18 liquid chromatography-mass spectrometry on plasma samples from 100 NVAMD patients and 192 controls. Data for mass/charge ratio ranging from 85 to 850 were captured, and metabolic features were extracted using xMSanalyzer. Nested feature selection was used to identify metabolites that discriminated between NVAMD patients and controls. Pathway analysis was performed with Mummichog 2.0. Hierarchical clustering was used to examine the relationship between the discriminating metabolites and NVAMD patients and controls. Results: Of the 10,917 metabolic features analyzed, a set of 159 was identified that distinguished NVAMD patients from controls (area under the curve of 0.83). Of these features, 39 were annotated with confidence and included multiple carnitine metabolites. Pathway analysis revealed that the carnitine shuttle pathway was significantly altered in NVAMD patients (P = 0.0001). Tandem mass spectrometry confirmed the molecular identity of five carnitine shuttle pathway acylcarnitine intermediates that were increased in NVAMD patients. Hierarchical cluster analysis revealed that 51% of the NVAMD patients had similar metabolic profiles, whereas the remaining 49% displayed greater variability in their metabolic profiles. Conclusions: Multiple long-chain acylcarnitines that are part of the carnitine shuttle pathway were significantly increased in NVAMD patients compared to controls, suggesting that fatty acid metabolism may be involved in NVAMD pathophysiology. Cluster analysis suggested that clinically indistinguishable NVAMD patients can be separated into distinct subgroups based on metabolic profiles.

Indexed as

AgedCarnitineChoroidal NeovascularizationChromatography, LiquidFatty AcidsFemaleHumansMaleMetabolic Networks and PathwaysMetabolomicsTandem Mass SpectrometryWet Macular DegenerationacylcarnitineCarnitineFatty Acids

Identifiers

PMID30326066
PMCPMC6188466
OpenAlexW2896848452

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.