Evidence map›Paper›PMID 30325084›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2018

Characterization of cis-regulatory elements for Fgf10 expression in the chick embryo.

Hiroko Kawakami, Austin Johnson, Yu Fujita, Avery Swearer, Naoyuki Wada, Yasuhiko Kawakami

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Hiroko KawakamiDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, Minnesota.
Austin JohnsonDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, Minnesota.
Yu FujitaDepartment of Applied Biological Science, Tokyo University of Science, Noda, Chiba, Japan.
Avery SwearerDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, Minnesota.
Naoyuki WadaDepartment of Applied Biological Science, Tokyo University of Science, Noda, Chiba, Japan.
Yasuhiko KawakamiDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, Minnesota.ORCID 0000-0002-0043-9705
University of Minnesota · USTokyo University of Science · JP

Funding

Genetic Regulation of Progenitor Cells in Appendicular Skeletal DevelopmentR01AR064195 · NIAMS · UNIVERSITY OF MINNESOTA · PI KAWAKAMI, YASUHIKO · 2013 to 2022
$3.3M
NIAMS NIH HHS R01 AR064195
6 · The paper itself

Abstract

backgroundFgf10 is expressed in various tissues and organs, such as the limb bud, heart, inner ear, and head mesenchyme. Previous studies identified Fgf10 enhancers for the inner ear and heart. However, Fgf10 enhancers for other tissues have not been identified.

resultsBy using primary culture chick embryo lateral plate mesoderm cells, we compared activities of deletion constructs of the Fgf10 promoter region, cloned into a promoter-less luciferase reporter vector. We identified a 0.34-kb proximal promoter that can activate luciferase expression. Then, we cloned 11 evolutionarily conserved sequences located within or outside of the Fgf10 gene into the 0.34-kb promoter-luciferase vector, and tested their activities in vitro using primary cultured cells. Two sequences showed the highest activities. By using the Tol2 system and electroporation into chick embryos, activities of the 0.34-kb promoter with and without the two sequences were tested in vivo. No activities were detected in limb buds. However, the 0.34-kb promoter exhibited activities in the dorsal midline of the brain, while Fgf10 is detected in broader region in the brain. The two noncoding sequences negatively acted on the 0.34-kb promoter in the brain.

conclusionsThe proximal 0.34-kb promoter has activities to drive expression in restricted areas of the brain. Developmental Dynamics 247:1253-1263, 2018. © 2018 Wiley Periodicals, Inc.

Indexed as

AnimalsBrainCells, CulturedChick EmbryoConserved SequenceElectroporationEmbryo, NonmammalianFibroblast Growth Factor 10Limb BudsMesodermPromoter Regions, GeneticRegulatory Elements, TranscriptionalFGF10 protein, humanFibroblast Growth Factor 10chick embryosenhancerFgf10in vivo electroporationprimary culture

Identifiers

PMID30325084
PMCPMC6275112
OpenAlexW2897580476

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.