Evidence map›Paper›PMID 30323970›Full record

ArticleAmerican journal of cancer research2018

Lung tissue microbial profile in lung cancer is distinct from emphysema.

Yanhong Liu, Jacqueline L O'Brien, Nadim J Ajami, Michael E Scheurer, E Susan Amirian, Georgina Armstrong, Spiridon Tsavachidis, Aaron P Thrift, Li Jiao, Matthew C Wong and 5 more

Open access · greenAbstract read
In one paragraph

Article in American journal of cancer research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. [Research Progress on the Relationship between Intratumor Microbiota and Lung Cancer].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2025
    Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Yanhong LiuDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Jacqueline L O'BrienDepartment of Molecular Virology and Microbiology, Baylor College of Medicine Houston, TX 77030, USA.
Nadim J AjamiDepartment of Molecular Virology and Microbiology, Baylor College of Medicine Houston, TX 77030, USA.
Michael E ScheurerDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
E Susan AmirianDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Georgina ArmstrongDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Spiridon TsavachidisDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Aaron P ThriftDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Li JiaoDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Matthew C WongDepartment of Molecular Virology and Microbiology, Baylor College of Medicine Houston, TX 77030, USA.
Daniel P SmithDepartment of Molecular Virology and Microbiology, Baylor College of Medicine Houston, TX 77030, USA.
Margaret R SpitzDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Melissa L BondyDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Joseph F PetrosinoDepartment of Molecular Virology and Microbiology, Baylor College of Medicine Houston, TX 77030, USA.
Farrah KheradmandDan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine Houston, TX 77030, USA.
Baylor College of Medicine · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
TARGETED GENOMICS FACILITY COREP30ES023512 · NIEHS · TEXAS A&M AGRILIFE RESEARCH · PI DEUTZ, NICOLAAS E · 2014 to 2017
$3.3M
Inflammation Genes and Lung Cancer RiskR01CA127219 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SPITZ, MARGARET R · 2008 to 2013
$3.1M
Viral-induced T Cell Responses in COPD ExacerbationR01HL082487 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI KHERADMAND, FARRAH · 2005 to 2009
$2.6M
Ancillary T Cell Based Studies in SPIROMICSR01HL110883 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI KHERADMAND, FARRAH · 2012 to 2015
$1.6M
Lung Cancer Prediction Models Incorporating Exome Data from Extreme PhenotypesK07CA181480 · NCI · BAYLOR COLLEGE OF MEDICINE · PI LIU, YANHONG · 2014 to 2017
$511k
NCI NIH HHS K07 CA181480NCI NIH HHS P30 CA125123NCI NIH HHS R01 CA127219NHLBI NIH HHS R01 HL082487NHLBI NIH HHS R01 HL110883NIDDK NIH HHS P30 DK056338NIEHS NIH HHS P30 ES023512
6 · The paper itself

Abstract

objectivesThe composition and structure of site-specific microbiota have been investigated as potential biomarkers for a variety of chronic inflammatory diseases and cancers. While many studies have focused on the changes in the airway microbiota using respiratory specimens from patients with various respiratory diseases, more research is needed to explore the microbial profiles within the distal lung parenchyma in smokers with lung cancer and/or emphysema. MATERIALS AND

methodsTo describe and contrast lung tissue-associated microbial signatures in smokers with lung cancer and/or emphysema, we employed culture-independent pyrosequencing of 16S rRNA gene hypervariable V4 region and compositional analysis in non-malignant lung tissue samples obtained from 40 heavy smokers, including 10 emphysema-only, 11 lung cancer-only, and 19 with both lung cancer and emphysema. RESULTS AND

conclusionThe emphysema-only group presented a lower bacterial community evenness defined by a significantly lower Shannon diversity index compared to the lung cancer patients with or without emphysema (

Indexed as

16S rRNA genebacteriaemphysemaLung cancermicrobiome

Identifiers

PMID30323970
PMCPMC6176189
OpenAlexW3023401048

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.