Evidence map›Paper›PMID 30323354›Full record

ArticleScientific reports2018

BRCA1/2-negative, high-risk breast cancers (BRCAX) for Asian women: genetic susceptibility loci and their potential impacts.

Joo-Yeon Lee, Jisun Kim, Sung-Won Kim, Sue K Park, Sei Hyun Ahn, Min Hyuk Lee, Young Jin Suh, Dong-Young Noh, Byung Ho Son, Young Up Cho and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Joo-Yeon LeeDepartment of Health Science, Graduate School of Public Health, Seoul National University, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0001-5220-0950
Jisun KimDepartment of Surgery, University of Ulsan College of Medicine, Asan Medical Center, Seoul, Republic of Korea.
Sung-Won KimDepartment of Surgery, Daerim St. Mary's Hospital, Seoul, Republic of Korea.
Sue K ParkDepartment of Preventive Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Sei Hyun AhnDepartment of Surgery, University of Ulsan College of Medicine, Asan Medical Center, Seoul, Republic of Korea.
Min Hyuk LeeDepartment of Surgery, Soonchunhyang University Seoul Hospital, Seoul, Republic of Korea.
Young Jin SuhDepartment of Surgery, St. Vincent's Hospital, The Catholic University of Korea School of Medicine, Seoul, Republic of Korea.
Dong-Young NohCancer Research Institute, Seoul National University College of Medicine, Seoul, Republic of Korea.
Byung Ho SonDepartment of Surgery, University of Ulsan College of Medicine, Asan Medical Center, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-6757-0388
Young Up ChoDepartment of Surgery, Yonsei University College of Medicine, Yonsei Cancer Center, Seoul, Republic of Korea.
Sae Byul LeeDepartment of Surgery, University of Ulsan College of Medicine, Asan Medical Center, Seoul, Republic of Korea.
Jong Won LeeDepartment of Surgery, University of Ulsan College of Medicine, Asan Medical Center, Seoul, Republic of Korea. jjjongwr@hanmail.net.ORCID http://orcid.org/0000-0001-7875-1603
John L HopperDepartment of Health Science, Graduate School of Public Health, Seoul National University, Seoul, Republic of Korea. j.hopper@unimelb.edu.au.
Joohon SungDepartment of Health Science, Graduate School of Public Health, Seoul National University, Seoul, Republic of Korea. jsung@snu.ac.kr.
Seoul National University · KRUlsan College · KRSoonchunhyang University Hospital Seoul · KRThe Catholic University of Korea Seoul St. Mary's Hospital · KRThe Catholic University of Korea St. Vincent's Hospital · KRYonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

"BRCAX" refers breast cancers occurring in women with a family history predictive of being a BRCA1/2 mutation carrier, but BRCA1/2 genetic screening has failed to find causal mutations. In this study, we report the findings of the genetic architecture of BRCAX with novel and redefined candidate loci and their potential impacts on preventive strategy. We performed a genome-wide association study involving 1,469 BRCAX cases from the Korean Hereditary Breast Cancer study, and high-risk breast cancer cases (1,482 Asians and 9,902 Europeans) from the Breast Cancer Association Consortium. We also evaluated the previously reported susceptibility loci for their roles in the high-risk breast cancers. We have identified three novel loci (PDE7B, UBL3, and a new independent marker in CDKN2B-AS1) associated with BRCAX, and replicated previously reported SNPs (24 of 92) and moderate/high-penetrance (seven of 23) genes for Korean BRCAX. For the novel candidate loci, evidence supported their roles in regulatory function. We estimated that the common low-penetrance loci might explain a substantial part of high-risk breast cancer (39.4% for Koreans and 24.0% for Europeans). Our study findings suggest that common genetic markers with lower penetrance constitute a part of susceptibility to high-risk breast cancers, with potential implications for a more comprehensive genetic screening test.

Indexed as

AdultAsian PeopleBRCA1 ProteinBRCA2 ProteinBreastBreast NeoplasmsCyclic Nucleotide Phosphodiesterases, Type 7FemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMiddle AgedMutationPolymorphism, Single NucleotideRNA, Long NoncodingUbiquitinsBRCA1 ProteinBRCA1 protein, humanBRCA2 ProteinBRCA2 protein, humanCDKN2B antisense RNA, humanCyclic Nucleotide Phosphodiesterases, Type 7PDE7B protein, humanRNA, Long NoncodingUbiquitinsUBL3 protein, human

Identifiers

PMID30323354
PMCPMC6189145
OpenAlexW2897219759

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.