Evidence map›Paper›PMID 30323313›Full record

ArticleThe pharmacogenomics journal2019

Impact of single nucleotide polymorphisms on P450 oxidoreductase and peroxisome proliferator-activated receptor alpha on tacrolimus pharmacokinetics in renal transplant recipients.

Shuhui Si, Zijie Wang, Haiwei Yang, Zhijian Han, Jun Tao, Hao Chen, Ke Wang, Miao Guo, Ruoyun Tan, Ji-Fu Wei and 1 more

Abstract read
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In one paragraph

Article in The pharmacogenomics journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Shuhui SiDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Zijie WangDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Haiwei YangDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Zhijian HanDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Jun TaoDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Hao ChenDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Ke WangDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Miao GuoResearch Division of Clinical Pharmacology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Ruoyun TanDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China.
Ji-Fu WeiDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China. weijifu@hotmail.com.
Min GuDepartment of Urology, Nanjing Medical University First Affiliated Hospital, Nanjing, 210029, China. lancetgu@aliyun.com.ORCID http://orcid.org/0000-0003-1054-9200
Nanjing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The P450 oxidoreductase (POR) and peroxisome proliferator-activated receptor alpha (PPARA) genes are associated with the activity of cytochrome P450 enzymes in vivo. We aimed to investigate the impact of single nucleotide polymorphisms (SNPs) in the POR and PPARA genes on the pharmacokinetics of tacrolimus (TAC) in renal transplant recipients. A total of 220 recipients were assessed and 105 recipients were included for final quantitative analysis. Blood samples were collected and DNA was extracted. Targeting sequencing based on next-generation sequencing was applied to detect the SNPs in the POR and PPARA genes. In addition, a systematic review and meta-analysis was performed to comprehensively evaluate the influence of POR and PPARA mutations on the TAC concentrations. A total of 81 SNPs were obtained. Three SNPs (POR*28, Chr7:75619677 and Chr7:75614288) were found to be significantly associated with the TAC pharmacokinetics at 3 months, 6 months, and more than 12 months. No significant association was observed in the combined effect analysis of CYP3A4*1G and CYP3A5*3 with three significant SNPs in the POR gene. Age, post-transplant duration, and the use of sirolimus were identified as the most important factors that influenced the TAC concentrations. A meta-analysis of four studies results and our cohort indicated that compared with recipients carrying the CT or TT genotypes, recipients carrying the CC genotypes of POR*28 showed significantly higher TAC concentrations. Our study suggested the positive influence of mutations in the POR gene on TAC exposure at 3 months after kidney transplantation.

Indexed as

AdultCohort StudiesCytochrome P-450 Enzyme SystemFemaleGenotypeHumansKidney TransplantationMaleMeta-Analysis as TopicPolymorphism, Single NucleotidePPAR alphaRetrospective StudiesSirolimusTacrolimusTransplant RecipientsCytochrome P-450 Enzyme SystemPOR protein, humanPPAR alphaSirolimusTacrolimus

Identifiers

PMID30323313
OpenAlexW2897371679

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.