Evidence map›Paper›PMID 30322904›Full record

ArticleG3 (Bethesda, Md.)2018

Regulation of Root Angle and Gravitropism.

Ted W Toal, Mily Ron, Donald Gibson, Kaisa Kajala, Bessie Splitt, Logan S Johnson, Nathan D Miller, Radka Slovak, Allison Gaudinier, Rohan Patel and 6 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Intrinsic Mechanism of CaClInternational journal of molecular sciences · 2024
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Identification of tomato root growth regulatory genes and transcription factors through comparative transcriptomic profiling of different tissues.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  9. Wheat root systems as a breeding target for climate resilience.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Review
  10. Article
  11. Translational regulation contributes to the elevated COThe Plant journal : for cell and molecular biology · 2020
    Article
  12. RGPDB: database of root-associated genes and promoters in maize, soybean, and sorghum.Database : the journal of biological databases and curation · 2020
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 3 countries.

Ted W ToalDepartment of Plant Biology and Genome Center.ORCID 0000-00002-00967-4998
Mily RonDepartment of Plant Biology and Genome Center.ORCID 0000-0003-1682-7275
Donald GibsonDepartment of Plant Biology and Genome Center.ORCID 0000-0003-4311-4668
Kaisa KajalaDepartment of Plant Biology and Genome Center.ORCID 0000-0001-6483-7473
Bessie SplittDepartment of Botany, University of Wisconsin, 430 Lincoln Drive, Madison, Wisconsin.ORCID 0000-00002-5387-6300
Logan S JohnsonDepartment of Botany, University of Wisconsin, 430 Lincoln Drive, Madison, Wisconsin.
Nathan D MillerDepartment of Botany, University of Wisconsin, 430 Lincoln Drive, Madison, Wisconsin.
Radka SlovakGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Dr. Bohr-Gasse 3, 1030 Vienna, Austria.ORCID 0000-00002-9963-5975
Allison GaudinierDepartment of Plant Biology and Genome Center.ORCID 0000-00002-4350-6760
Rohan PatelDepartment of Cell and Systems Biology, Centre for the Analysis of Genome Evolution and Function, University of Toronto, 25 Willcocks St., Toronto, Ontario, Canada.
Miguel de LucasDepartment of Plant Biology and Genome Center.ORCID 0000-0002-6544-6404
Nicholas J ProvartDepartment of Cell and Systems Biology, Centre for the Analysis of Genome Evolution and Function, University of Toronto, 25 Willcocks St., Toronto, Ontario, Canada.ORCID 0000-00001-5551-7232
Edgar P SpaldingDepartment of Botany, University of Wisconsin, 430 Lincoln Drive, Madison, Wisconsin.ORCID 00000-0002-68900-4765
Wolfgang BuschGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Dr. Bohr-Gasse 3, 1030 Vienna, Austria.ORCID 0000-0003-2042-7290
Daniel J KliebensteinDeparment of Plant Sciences, UC Davis, California.
Siobhan M BradyDepartment of Plant Biology and Genome Center sbrady@ucdavis.edu.ORCID 0000-0001-9424-8055
University of Toronto · CAAustrian Academy of Sciences · ATUniversity of California, Davis · USVienna Biocenter · AT

Funding

Transgenic Mouse and Biobank CoreP01CA095616 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DEPINHO, RONALD ANTHONY · 2003 to 2012
$20.3M
Genome Sequencer FLXS10RR029668 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI NGAI, JOHN J. · 2010 to 2010
$623k
Illumina Sequencer to Facilitate Functional Genomics at BerkeleyS10RR027303 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI TAYLOR, JOHN W. · 2010 to 2010
$500k
Howard Hughes Medical InstituteNCI NIH HHS P01 CA095616NCRR NIH HHS S10 RR027303NCRR NIH HHS S10 RR029668
6 · The paper itself

Abstract

Regulation of plant root angle is critical for obtaining nutrients and water and is an important trait for plant breeding. A plant's final, long-term root angle is the net result of a complex series of decisions made by a root tip in response to changes in nutrient availability, impediments, the gravity vector and other stimuli. When a root tip is displaced from the gravity vector, the short-term process of gravitropism results in rapid reorientation of the root toward the vertical. Here, we explore both short- and long-term regulation of root growth angle, using natural variation in tomato to identify shared and separate genetic features of the two responses. Mapping of expression quantitative trait loci mapping and leveraging natural variation between and within species including Arabidopsis suggest a role for

Indexed as

Acid PhosphataseArabidopsisArabidopsis ProteinsGlycoproteinsPlant RootsGravitropismAcid PhosphataseArabidopsis ProteinsGlycoproteinspurple acid phosphatasegravitropismroottomato

Identifiers

PMID30322904
PMCPMC6288823
OpenAlexW2896560518

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.