Evidence map›Paper›PMID 30321187›Full record

ArticlePloS one2018

Structure of natural variant transglutaminase 2 reveals molecular basis of gaining stability and higher activity.

Hyun Ji Ha, Sunghark Kwon, Eui Man Jeong, Chang Min Kim, Ki Baek Lee, In-Gyu Kim, Hyun Ho Park

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. The Role of Transglutaminase 2 in Cancer: An Update.International journal of molecular sciences · 2024
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hyun Ji HaSchool of Pharmacy, Chung-Ang University, Seoul, South Korea.
Sunghark KwonSchool of Pharmacy, Chung-Ang University, Seoul, South Korea.
Eui Man JeongDepartment of Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul, South Korea.
Chang Min KimSchool of Pharmacy, Chung-Ang University, Seoul, South Korea.
Ki Baek LeeDepartment of Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul, South Korea.
In-Gyu KimDepartment of Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul, South Korea.
Hyun Ho ParkSchool of Pharmacy, Chung-Ang University, Seoul, South Korea.ORCID 0000-0001-9928-0847
Chung-Ang University · KRSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multi-functional transglutaminase 2 (TG2), which possesses protein cross-linking and GTP hydrolysis activities, is involved in various cellular processes, including apoptosis, angiogenesis, wound healing, and neuronal regeneration, and is associated with many human diseases, including inflammatory disease, celiac disease, neurodegenerative disease, diabetes, tissue fibrosis, and cancers. Although most biochemical and cellular studies have been conducted with the TG2 (G224) form, the TG2 (G224V) form has recently emerged as a putative natural variant of TG2. In this study, we characterized the putative natural form of TG2, TG2 (G224V), and through a new crystal structure of TG2 (G224V), we revealed how TG2 (G224V) gained stability and higher Ca2+-dependent activity than an artificial variant of TG2 (G224).

Indexed as

Amino Acid SubstitutionCalciumCatalytic DomainCrystallography, X-RayEnzyme StabilityGenetic VariationGTP-Binding ProteinsHumansKineticsModels, MolecularMutagenesis, Site-DirectedProtein ConformationProtein Glutamine gamma Glutamyltransferase 2Recombinant ProteinsTransglutaminasesCalciumGTP-Binding ProteinsProtein Glutamine gamma Glutamyltransferase 2Recombinant ProteinsTransglutaminases

Identifiers

PMID30321187
PMCPMC6188745
OpenAlexW2897946830

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.