Evidence map›Paper›PMID 30319751›Full record

ArticleChemical science2018

Synthetic biology approaches and combinatorial biosynthesis towards heterologous lipopeptide production.

Fu Yan, Christian Burgard, Alexander Popoff, Nestor Zaburannyi, Gregor Zipf, Josef Maier, Hubert S Bernauer, Silke C Wenzel, Rolf Müller

Abstract read
In one paragraph

Article in Chemical science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Genome-Guided Metabolomic Profiling of Peptaibol-ProducingInternational journal of molecular sciences · 2025
    Article
  2. Review
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  6. Article
  7. Article
  8. Article
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  11. Article
  12. Review
  13. Heterologous production of cyanobacterial compounds.Journal of industrial microbiology & biotechnology · 2021
    Review
  14. Review
  15. Article
  16. Simultaneous Multiplex Genome EngineeringFrontiers in microbiology · 2021
    Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Fu YanHelmholtz Institute for Pharmaceutical Research Saarland (HIPS) , Helmholtz Centre for Infection Research and Department of Pharmacy at Saarland University , Saarland University Campus , Building E8.1 , 66123 Saarbrücken , Germany . Email: rom@helmholtz-hzi.de.
Christian BurgardHelmholtz Institute for Pharmaceutical Research Saarland (HIPS) , Helmholtz Centre for Infection Research and Department of Pharmacy at Saarland University , Saarland University Campus , Building E8.1 , 66123 Saarbrücken , Germany . Email: rom@helmholtz-hzi.de.ORCID 0000-0003-1374-0449
Alexander PopoffHelmholtz Institute for Pharmaceutical Research Saarland (HIPS) , Helmholtz Centre for Infection Research and Department of Pharmacy at Saarland University , Saarland University Campus , Building E8.1 , 66123 Saarbrücken , Germany . Email: rom@helmholtz-hzi.de.
Nestor ZaburannyiHelmholtz Institute for Pharmaceutical Research Saarland (HIPS) , Helmholtz Centre for Infection Research and Department of Pharmacy at Saarland University , Saarland University Campus , Building E8.1 , 66123 Saarbrücken , Germany . Email: rom@helmholtz-hzi.de.
Gregor ZipfATG:biosynthetics GmbH , Weberstraße 40 , 79249 Merzhausen , Germany.
Josef MaierIStLS - Information Services to Life Sciences , Härlestraße 24/1 , 78727 Oberndorf am Neckar/Boll , Germany.
Hubert S BernauerATG:biosynthetics GmbH , Weberstraße 40 , 79249 Merzhausen , Germany.
Silke C WenzelHelmholtz Institute for Pharmaceutical Research Saarland (HIPS) , Helmholtz Centre for Infection Research and Department of Pharmacy at Saarland University , Saarland University Campus , Building E8.1 , 66123 Saarbrücken , Germany . Email: rom@helmholtz-hzi.de.
Rolf MüllerHelmholtz Institute for Pharmaceutical Research Saarland (HIPS) , Helmholtz Centre for Infection Research and Department of Pharmacy at Saarland University , Saarland University Campus , Building E8.1 , 66123 Saarbrücken , Germany . Email: rom@helmholtz-hzi.de.ORCID 0000-0002-1042-5665

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Synthetic biology techniques coupled with heterologous secondary metabolite production offer opportunities for the discovery and optimisation of natural products. Here we developed a new assembly strategy based on type IIS endonucleases and elaborate synthetic DNA platforms, which could be used to seamlessly assemble and engineer biosynthetic gene clusters (BGCs). By applying this versatile tool, we designed and assembled more than thirty different artificial myxochromide BGCs, each around 30 kb in size, and established heterologous expression platforms using a derivative of

Identifiers

PMID30319751
PMCPMC6180311

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.