Evidence map›Paper›PMID 30319747›Full record

ArticleChemical science2018

Oxidative dehalogenation and denitration by a flavin-dependent monooxygenase is controlled by substrate deprotonation.

Panu Pimviriyakul, Panida Surawatanawong, Pimchai Chaiyen

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Evolution of pollutant biodegradation.Applied microbiology and biotechnology · 2025
    Review
  3. Review
  4. Review
  5. Pimchai Chaiyen's biography.Biophysical reviews · 2022
    Article
  6. Tuning of pThe Journal of biological chemistry · 2020
    Article
  7. Review
  8. Article
  9. Monooxygenation of aromatic compounds by flavin-dependent monooxygenases.Protein science : a publication of the Protein Society · 2019
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Panu PimviriyakulSchool of Biomolecular Science and Engineering , Vidyasirimedhi Institute of Science and Technology (VISTEC) , Wangchan Valley , Rayong , 21210 , Thailand . Email: pimchai.chaiyen@vistec.ac.th.
Panida SurawatanawongDepartment of Chemistry and Center of Excellence for Innovation in Chemistry , Faculty of Science , Mahidol University , Bangkok , 10400 , Thailand.ORCID 0000-0002-0300-4205
Pimchai ChaiyenSchool of Biomolecular Science and Engineering , Vidyasirimedhi Institute of Science and Technology (VISTEC) , Wangchan Valley , Rayong , 21210 , Thailand . Email: pimchai.chaiyen@vistec.ac.th.ORCID 0000-0002-8533-1604
Mahidol University · THVidyasirimedhi Institute of Science and Technology · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enzymes that are capable of detoxifying halogenated phenols (HPs) and nitrophenols (NPs) are valuable for bioremediation and waste biorefining. HadA monooxygenase was found to perform dual functions of oxidative dehalogenation (hydroxylation plus halide elimination) and denitration (hydroxylation plus nitro elimination). Rate constants associated with individual steps of HadA reactions with phenol, halogenated phenols and nitrophenols were measured using combined transient kinetic approaches of stopped-flow absorbance/fluorescence and rapid-quench flow techniques. Density functional theory was used to calculate the thermodynamic and electronic parameters associated with hydroxylation and group elimination steps. These parameters were correlated with the rate constants of hydroxylation, group elimination, and overall product formation to identify factors controlling individual steps. The results indicated that the hydroxylation rate constant is higher when the p

Identifiers

PMID30319747
PMCPMC6180312
OpenAlexW2885489194

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.