Evidence map›Paper›PMID 30318509›Full record

ArticleBritish journal of cancer2018

Phenotype-independent DNA methylation changes in prostate cancer.

Davide Pellacani, Alastair P Droop, Fiona M Frame, Matthew S Simms, Vincent M Mann, Anne T Collins, Connie J Eaves, Norman J Maitland

Open access · hybridAbstract read
In one paragraph

Article in British journal of cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Differential DNA Methylation in the Benign and Cancerous Prostate Tissue of African American and European American Men.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2025
    Article
  3. Hyperglycemia and microRNAs in prostate cancer.Prostate cancer and prostatic diseases · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Davide PellacaniCancer Research Unit, Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK. dpellacani@bccrc.ca.
Alastair P DroopCancer Research Unit, Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
Fiona M FrameCancer Research Unit, Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
Matthew S SimmsDepartment of Urology, Castle Hill Hospital (Hull & East Yorkshire Hospitals NHS Trust), Cottingham, HU16 5JQ, UK.
Vincent M MannCancer Research Unit, Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
Anne T CollinsCancer Research Unit, Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.ORCID http://orcid.org/0000-0002-2991-2703
Connie J EavesTerry Fox Laboratory, BC Cancer Agency, 675 West 10th Avenue, Vancouver, BC, V5Z 1L3, Canada.
Norman J MaitlandCancer Research Unit, Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
Yorkshire Cancer Research · GBBC Cancer Agency · CAHull and East Yorkshire Hospitals NHS Trust · GB

Funding

Medical Research Council MR/L01629X/1Yorkshire Cancer Research Y257PA
6 · The paper itself

Abstract

backgroundHuman prostate cancers display numerous DNA methylation changes compared to normal tissue samples. However, definitive identification of features related to the cells' malignant status has been compromised by the predominance of cells with luminal features in prostate cancers.

methodsWe generated genome-wide DNA methylation profiles of cell subpopulations with basal or luminal features isolated from matched prostate cancer and normal tissue samples.

resultsMany frequent DNA methylation changes previously attributed to prostate cancers are here identified as differences between luminal and basal cells in both normal and cancer samples. We also identified changes unique to each of the two cancer subpopulations. Those specific to cancer luminal cells were associated with regulation of metabolic processes, cell proliferation and epithelial development. Within the prostate cancer TCGA dataset, these changes were able to distinguish not only cancers from normal samples, but also organ-confined cancers from those with extraprostatic extensions. Using changes present in both basal and luminal cancer cells, we derived a new 17-CpG prostate cancer signature with high predictive power in the TCGA dataset.

conclusionsThis study demonstrates the importance of comparing phenotypically matched prostate cell populations from normal and cancer tissues to unmask biologically and clinically relevant DNA methylation changes.

Indexed as

DNA MethylationPhenotypeCpG IslandsHumansMaleProstatic Neoplasms

Identifiers

PMID30318509
PMCPMC6219500
OpenAlexW2897015353

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.