Evidence map›Paper›PMID 30317511›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2019

A Nanodisc-Cell Fusion Assay with Single-Pore Sensitivity and Sub-millisecond Time Resolution.

Natasha R Dudzinski, Zhenyong Wu, Erdem Karatekin

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Nascent fusion pore opening monitored at single-SNAREpin resolution.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Natasha R DudzinskiInterdepartmental Neuroscience Program, Yale University, New Haven, CT, USA.
Zhenyong WuNanobiology Institute, Yale University, West Haven, CT, USA. zhenyong.wu@yale.edu.
Erdem KaratekinNanobiology Institute, Yale University, West Haven, CT, USA. erdem.karatekin@yale.edu.

Funding

Nucleation and dynamics of exocytotic fusion poresR01NS113236 · NINDS · YALE UNIVERSITY · PI KARATEKIN, ERDEM · 2019 to 2023
$1.8M
Nucleation and dynamics of exocytotic fusion poresR01GM108954 · NIGMS · YALE UNIVERSITY · PI KARATEKIN, ERDEM · 2014 to 2018
$1.6M
NIGMS NIH HHS R01 GM108954NINDS NIH HHS R01 NS113236
6 · The paper itself

Abstract

During exocytosis, vesicles fuse with the plasma membrane and release their contents. The fusion pore is the initial, nanometer-sized connection between the plasma membrane and the cargo-laden vesicle. A growing body of evidence points toward the fusion pore being a regulator of exocytosis, but the shortcomings of current experimental techniques to investigate single-fusion pores make it difficult to study factors governing pore behavior. Here we describe an assay that fuses v-SNARE-reconstituted nanodiscs with cells ectopically expressing "flipped" t-SNAREs to monitor dynamics of single fusion pores in a biochemically defined system using electrical recordings. We also describe a fluorescence microscopy-based approach to monitor nanodisc-cell fusion that is much simpler to employ, but cannot resolve single pores.

Indexed as

Biological AssayCell Culture TechniquesCell MembraneExocytosisGenetic EngineeringHeLa CellsHumansMembrane FusionMicroscopy, FluorescenceNanostructuresPatch-Clamp TechniquesSecretory VesiclesSynaptosomal-Associated Protein 25Syntaxin 1SNAP25 protein, humanSynaptosomal-Associated Protein 25Syntaxin 1ElectrophysiologyExocytosisFusion poreMembrane fusionNanodiscSNAREs

Identifiers

PMID30317511
PMCPMC6335040

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.