Evidence map›Paper›PMID 30315181›Full record

ArticleScientific reports2018

MicroRNA binding mediated Functional sequence variant in 3'-UTR of DNA repair Gene XPC in Age-related Cataract.

Xi Zou, Lihua Kang, Mei Yang, Jian Wu, Huaijin Guan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. PeerJ · 2024
    Article
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  5. Circ_HIPK3 Inhibits HBiochemical genetics · 2023
    Article
  6. Article
  7. Article
  8. Article
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  10. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Xi ZouDepartment of Ophthalmology, Affiliated Hospital of Nantong University, Nantong, Jiangsu, China.
Lihua KangDepartment of Ophthalmology, Affiliated Hospital of Nantong University, Nantong, Jiangsu, China.
Mei YangDepartment of Ophthalmology, Affiliated Hospital of Nantong University, Nantong, Jiangsu, China.
Jian WuDepartment of Ophthalmology, Affiliated Hospital of Nantong University, Nantong, Jiangsu, China.
Huaijin GuanDepartment of Ophthalmology, Affiliated Hospital of Nantong University, Nantong, Jiangsu, China. guanhjeye@163.com.
Affiliated Hospital of Nantong University · CNChangzhou Third People's Hospital · CNNantong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA oxidative damage repair is strongly involved in the pathogenesis of age-related cataract (ARC). The sequence variants of in coding region of DNA repair genes have been shown to be associated with ARC. It is known that single nucleotide polymorphisms (SNPs) in the 3'-terminal untranslated region (3'-UTR) can alter the gene expression by binding with microRNAs (miRNAs). We hypothesize that SNP(s) in miRNA binding site of certain DNA oxidative damage repair genes might associate with ARC risk. We examined 10 miRNA binding SNPs in 3'-UTR of 7 oxidative damage genes and revealed the XPC- rs2229090 C allele was associated with nuclear type of ARC (ARNC) risk in Chinese population. The individuals with the variant G allele (CG and GG) of XPC- rs2229090 had higher XPC mRNA expression compared to individuals carrying CC genotype. The in vitro assay showed that luciferase reporter gene expression can be down regulated by hsa-miR-589-5p in cells transfected with rs2229090 C allele compared to G allele. These results suggested that the C allele of XPC-2229090 increase the risk with ARNC. The mechanism underlying might be due to the stronger interation of the C allele with hsa-miR-589-5p, resulting in lower XPC expression and DNA repair capability than the individuals carring G allele in lens.

Indexed as

3' Untranslated RegionsAgingDisease SusceptibilityDNA RepairAgedAged, 80 and overAllelesCase-Control StudiesCataractDNA-Binding ProteinsFemaleGene Expression RegulationHumansMaleMicroRNAsMiddle Aged3' Untranslated RegionsDNA-Binding ProteinsMicroRNAsXPC protein, human

Identifiers

PMID30315181
PMCPMC6185952
OpenAlexW2895815639

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.