Evidence map›Paper›PMID 30314311›Full record

ArticleInternational journal of molecular sciences2018

Combinations of Small RNA, RNA, and Degradome Sequencing Uncovers the Expression Pattern of microRNA⁻mRNA Pairs Adapting to Drought Stress in Leaf and Root of

Yang Ji, Peilin Chen, Jing Chen, Kayla K Pennerman, Xiaoyu Liang, Haidong Yan, Sifan Zhou, Guangyan Feng, Chengran Wang, Guohua Yin and 3 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 50 citations in OpenAlex.

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  14. Multi-Omics Analysis of Small RNA, Transcriptome, and Degradome inInternational journal of molecular sciences · 2020
    Article
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  19. Article
  20. Comparative transcriptome study of switchgrass (Biotechnology for biofuels · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Yang JiSichuan Animal Science Academy, Chengdu 610066, China. jiyang221@163.com.
Peilin ChenDepartment of Grassland Science, Faculty of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. chenpeilin1994@outlook.com.
Jing ChenDepartment of Grassland Science, Faculty of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. chenjing123ing@163.com.
Kayla K PennermanDepartment of Plant Biology, Rutgers, The State University of New Jersey, New Brunswick, NJ 08901, USA. kkp63@scarletmail.rutgers.edu.
Xiaoyu LiangSichuan Animal Science Academy, Chengdu 610066, China. liangxiaoyucao@163.com.
Haidong YanDepartment of Horticulture, Virginia Tech, Blacksburg, VA 24061, USA. yanhd@vt.edu.
Sifan ZhouDepartment of Grassland Science, Faculty of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. swanchou93@163.com.
Guangyan FengDepartment of Grassland Science, Faculty of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. b20152501@stu.sicau.edu.cn.
Chengran WangDepartment of Grassland Science, Faculty of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. wlr6299@sina.com.
Guohua YinDepartment of Plant Biology, Rutgers, The State University of New Jersey, New Brunswick, NJ 08901, USA. guohuayin1997@gmail.com.ORCID 0000-0001-8327-061X
Xinquan ZhangDepartment of Grassland Science, Faculty of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. Zhangxq@sicau.edu.cn.
Yuanbin HuSichuan Animal Science Academy, Chengdu 610066, China. huyuanbin2233@163.com.
Linkai HuangDepartment of Grassland Science, Faculty of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. huanglinkai@sicau.edu.cn.ORCID 0000-0001-7810-4852
Sichuan Agricultural University · CNSichuan Animal Science Academy · CNRutgers, The State University of New Jersey · USVirginia Tech · US

Funding

National Natural Science Foundation of China 31601364,31771866Sichuan Province Breeding Research 2016NYZ0039
6 · The paper itself

Abstract

Drought stress is a global problem, and the lack of water is a key factor that leads to agricultural shortages. MicroRNAs play a crucial role in the plant drought stress response; however, the microRNAs and their targets involved in drought response have not been well elucidated. In the present study, we used Illumina platform (https://www.illumina.com/) and combined data from miRNA, RNA, and degradome sequencing to explore the drought- and organ-specific miRNAs in orchardgrass (

Indexed as

DroughtsGene Expression Regulation, PlantStress, PhysiologicalAdaptation, BiologicalComputational BiologyDactylisGene Expression ProfilingGene OntologyHigh-Throughput Nucleotide SequencingMicroRNAsPlant LeavesPlant RootsRNA InterferenceRNA, MessengerRNA, PlantRNA StabilityMicroRNAsRNA, MessengerRNA, Plantdegradomedrought stressmiRNAorchardgrasstranscriptome

Identifiers

PMID30314311
PMCPMC6213654
OpenAlexW2896099246

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.