Evidence map›Paper›PMID 30312899›Full record

ArticleAquatic toxicology (Amsterdam, Netherlands)2018

Characterization of AHR1 and its functional activity in Atlantic sturgeon and shortnose sturgeon.

Nirmal K Roy, Melissa DellaTorre, Allison Candelmo, R Christopher Chambers, Ehren Habeck, Isaac Wirgin

Abstract read
In one paragraph

Article in Aquatic toxicology (Amsterdam, Netherlands), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Molecular and Functional Properties of the Atlantic Cod (Environmental science & technology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Nirmal K RoyDepartment of Environmental Medicine, NYU School of Medicine, United States.
Melissa DellaTorreDepartment of Environmental Medicine, NYU School of Medicine, United States.
Allison CandelmoDepartment of Environmental Medicine, NYU School of Medicine, United States; Northeast Fisheries Science Center, NOAA Fisheries, United States.
R Christopher ChambersNortheast Fisheries Science Center, NOAA Fisheries, United States.
Ehren HabeckNortheast Fisheries Science Center, NOAA Fisheries, United States.
Isaac WirginDepartment of Environmental Medicine, NYU School of Medicine, United States. Electronic address: isaac.wirgin@nyumc.org.
New York University · USNOAA National Marine Fisheries Service · US

Funding

RESEARCH IN ENVIRONMENTAL HEALTH SCIENCES (CENTER GRANT)P30ES000260 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ZELIKOFF, JUDITH TERRY · 1985 to 2020
$26.1M
NIEHS NIH HHS P30 ES000260
6 · The paper itself

Abstract

Sturgeon species are imperiled world-wide by a variety of anthropogenic stressors including chemical contaminants. Atlantic sturgeon, Acipenser oxyrinchus, and shortnose sturgeon, Acipenser brevirostrum, are largely sympatric acipenserids whose young life-stages are often exposed to high levels of benthic-borne PCBs and PCDD/Fs in large estuaries along the Atlantic Coast of North America. In previous laboratory studies, we demonstrated that both sturgeon species are sensitive to early life-stage toxicities from exposure to environmentally relevant concentrations of coplanar PCBs and TCDD. The sensitivity of young life-stages of fishes to these contaminants varies among species by three orders of magnitude and often is due to variation in the structure and function of the aryl hydrocarbon receptor (AHR) pathway. Unlike mammals, fishes have two forms of AHR (AHR1 and AHR2) with AHR2 usually being more highly expressed across tissues and functional in mediating toxicities. Based on previous studies in white sturgeon, A. transmontanus, we hypothesized that sturgeon taxa are unusually sensitive to these contaminants because of higher levels of expression and functional activity of AHR1 than in other fish taxa. To address this possibility, we characterized AHR1 in both Atlantic Coast sturgeon species, evaluated its' in vivo expression in young life-stages and in multiple tissues of shortnose sturgeon, and tested its ability to drive reporter gene expression in AHR-deficient cells treated with graded doses of PCB126 and TCDD. Similar to white sturgeon and lake sturgeon, AHR1 amino acid sequences in Atlantic sturgeon and shortnose sturgeon were more similar to mammalian AHRs and avian AHR1s than to AHR1 in other fishes, suggesting their greater functionality in sturgeon species than in other fishes. Exposure to graded doses of coplanar PCBs and TCDD usually failed to significantly induce AHR1 expression in young life-stages or most tissues of shortnose sturgeon. However, in reporter gene assays, AHR1 drove higher levels of gene expression than AHR2 alone, but their binary combination failed to drive higher levels of expression than either AHR alone. In total, our results suggest that AHR1 may be more functional in sturgeon species than in other fishes, but probably does not explain their heightened sensitivity to these contaminants.

Indexed as

FishesAnimalsGene Expression ProfilingGene Expression RegulationNorth AmericaPolychlorinated BiphenylsReceptors, Aryl HydrocarbonWater Pollutants, Chemical3,4,5,3',4'-pentachlorobiphenylPolychlorinated BiphenylsReceptors, Aryl HydrocarbonWater Pollutants, ChemicalAryl hydrocarbon receptor 1Coplanar PCBsEndangered sturgeon speciesGene expressionReporter gene assaysTCDD

Identifiers

PMID30312899
PMCPMC6246806
OpenAlexW2893607222

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.