Evidence map›Paper›PMID 30312354›Full record

ArticlePloS one2018

Identification of a strawberry NPR-like gene involved in negative regulation of the salicylic acid-mediated defense pathway.

Lin-Jie Shu, Jui-Yu Liao, Nai-Chun Lin, Chia-Lin Chung

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
9.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 41 citations in OpenAlex.

  1. Beyond Resistance Genes: Silencing Susceptibility.International journal of molecular sciences · 2026
    Review
  2. Article
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  4. Review
  5. UnravelingPlants (Basel, Switzerland) · 2022
    Article
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  10. Article
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  12. Article
  13. Genome-Wide Identification and Analysis of theInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Lin-Jie ShuDepartment of Plant Pathology and Microbiology, National Taiwan University, Taipei, Taiwan.
Jui-Yu LiaoDepartment of Plant Pathology and Microbiology, National Taiwan University, Taipei, Taiwan.
Nai-Chun LinDepartment of Agricultural Chemistry, National Taiwan University, Taipei, Taiwan.
Chia-Lin ChungDepartment of Plant Pathology and Microbiology, National Taiwan University, Taipei, Taiwan.ORCID 0000-0002-1612-0109
National Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hormonal modulation plays a central role in triggering various resistant responses to biotic and abiotic stresses in plants. In cultivated strawberry (Fragaria x ananassa), the salicylic acid (SA)-dependent defense pathway has been associated with resistance to Colletotrichum spp. and the other pathogens. To better understand the SA-mediated defense mechanisms in strawberry, we analyzed two strawberry cultivars treated with SA for their resistance to anthracnose and gene expression profiles at 6, 12, 24, and 48 hr post-treatment. Strawberry genes related to SA biosynthesis, perception, and signaling were identified from SA-responsive transcriptomes of the two cultivars, and the induction of 17 candidate genes upon SA treatment was confirmed by qRT-PCR. Given the pivotal role of the non-expressor of pathogenesis-related (NPR) family in controlling the SA-mediated defense signaling pathway, we then analyzed NPR orthologous genes in strawberry. From the expression profile, FaNPRL-1 [ortholog of FvNPRL-1 (gene20070 in F. vesca)] was identified as an NPR-like gene significantly induced after SA treatment in both cultivars. With a conserved BTB/POZ domain, ankyrin repeat domain, and nuclear localization signal, FvNPRL-1 was found phylogenetically closer to NPR3/NPR4 than NPR1 in Arabidopsis. Ectopic expression of FvNPRL-1 in the Arabidopsis thaliana wild type suppressed the SA-mediated PR1 expression and the resistance to Pseudomonas syringae pv. tomato DC3000. Transient expression of FvNPRL-1 fused with green fluorescent protein in Arabidopsis protoplasts showed that SA affected nuclear translocation of FvNPRL-1. FvNPRL-1 likely functions similar to Arabidopsis NPR3/NPR4 as a negative regulator of the SA-mediated defense.

Indexed as

ArabidopsisDisease ResistanceFragariaGenes, PlantPhylogenyPlant DiseasesPlant Growth RegulatorsPlant ImmunityPlant ProteinsPlants, Genetically ModifiedSalicylic AcidTranscriptomePlant Growth RegulatorsPlant ProteinsSalicylic Acid

Identifiers

PMID30312354
PMCPMC6185849
OpenAlexW2897193795

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.